Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1124 ATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTTATCACATGGTGCATCAGAAATGCTACAGTCGTGGAGCCGTCAAGAAATTTTGCAAATCCTCTGTGCTGAGATGGGAAAGGAAAGGAAGTATACTGGgttaacaaaattgaaaattatagaAAACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGGAGGCCATGAAATTGCATCAGACCTTGAACCGCATTCTTCTGCTTCACATGGCCAGAAACCAGCTAAAAGGCAGAGAAAAAATGAGAATCCATCTCGATTACCTCTTCCAGTAAATGATGTTTCTGTGAATAATGGAGTTGGAGATGTAGGTAGTATTACATACTGCAAAAACACAGCTTGCAAAGCTACCCTAAGTGAAGCAGATGCGTTTTGCAAAAGATGCTCATGTTGCATTTGCCATAAATATGATGACAACAAAGATCCCAGCCTTTGGTTAATATGTGGCTCTGAGCCTCCATTTCTTGGTGTTTCTTGTGGATTGTCATGTCATCTTGAGTGTGCTTTAAAGCATGAGAGTTCTGGAATTGCTGTAGATGGAAAATGTCCAAAGCTTGATGGAGGTTTCTACTGCATTTCGTGTGGGAAAATGAATGATTTGCTCGGATGCTGGAGAAAACAACTGACGGTGGCAAAGGATACCAGACGTGTGGACATACTATGCTACCGTGTTTCCTTAAGCCAGAGAATTTTACAAGGGACTGAAAAGTATCAAAAGCTCCATGAAATCGTTGATGAGGCAGTGAGGAAACTTGAACTTGAAGTGGGTCCGGTGACTGGCTCACCAGTGAAGATTGGTCGGGGTATTGTGAACAGACTTTCATCAGGGCCAGAGGTTCAGAAACTTTGTGGtttggctttggaatcactagATTCTATTCTTTCTAAAAGGGTGCAGCCCACATTGCCTAATTCAACAATTCAAgATACAAATTTGATTGCTCCAAATATGGTGAGGTTCGAAGATGTCACCGATACATCCCTGACTGTGATTTTGGGTTCTGAAGATCCTTCTGGAGAAAATATTCTTGGCTATGCCTTGTGGCATCGCAAGGCCCATGATGTAGACTATCCTGTTGAGCCAGCTTGCACTTTGCGTCTACCAATTAGAAGTTCCAGTATAAGGGGTCTAATTCCAGCTACAGAATATTGTTTCAAAGTTGTTCCCTTTAATGATTCGAGGGAGCTGGGTATGTGTGAAGTTCACGTCACAACAGACCATGGTGAGGAAGAAGTCCCTAACTGCTCAGCAACAGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGTAGCCATTCCAATCCTTCTTCAGTGGAAGATGAAACTAATAACAGTAATCCATACAGTGATCAGACCGATAATCGAGCAGACAATTATCTTACATATCACAAGGACACCGACAAGCTTGCTTCTGAAAATTTGTCAAATGATGCTATTAAATGTTCCAACACAGGTGGAGGGGGACTACCAGCAAATGCAGATTCTTTGTTAGAAAAGCAACGTGCTAAAGGTTTGGCTGTAACCATTCCTGGTTCTGAAGTGCTAAAGCTTGAAAACAACCACTCACCAGAGGAACAAATCACTGAGGACTTGAGTACTGATGATGGGTTGAATTCCCCTGTTCAGATTGCGAGGGAATGTTTGCCTTTGGTACGTAGCTCTGAAGCAGGCTTGCCTATTACTCCCTGCAAGTTGGAAATACTCAAGGAAGGACCAGGAAGAAATGGGAGACTGAAGTCGATTGGGAAGGATCAAGAAAATGGGTCTGGGAAAAGAGAGGGCCCCCAAGATGGAAGCACATCTAAGAGAGGTGCAGAAAGGCAAGGTGAGGGTTGTGCTGGCAATGGGTTTTCAGATCGGGATTTTGAGTATTATGTGAAGGTGATAAGATGGTTAGAGTGTGAAGGACATATTGAAAAGAACTTCAGACAGAAATTTTTGACTTGGTACAGCTTGAGAGCAACACCACAGGAAGTGAAGATCGTGAAAGTATACATAGATACATTCCTTGAAGATCCAGCTTCTCTTGCAGAGCAGCTTGTGGACACATTCTCAGAATGTGTATCAAACAAGAGACCATCAGTGGTGCCAGCTGGGTTCTGCATGAAGCTTTGGCATTGA 2154 0.4178 MEEKRELVYEISKLSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGHEIASDLEPHSSASHGQKPAKRQRKNENPSRLPLPVNDVSVNNGVGDVGSITYCKNTACKATLSEADAFCKRCSCCICHKYDDNKDPSLWLICGSEPPFLGVSCGLSCHLECALKHESSGIAVDGKCPKLDGGFYCISCGKMNDLLGCWRKQLTVAKDTRRVDILCYRVSLSQRILQGTEKYQKLHEIVDEAVRKLELEVGPVTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSILSKRVQPTLPNSTIQDTNLIAPNMVRFEDVTDTSLTVILGSEDPSGENILGYALWHRKAHDVDYPVEPACTLRLPIRSSSIRGLIPATEYCFKVVPFNDSRELGMCEVHVTTDHGEEEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPYSDQTDNRADNYLTYHKDTDKLASENLSNDAIKCSNTGGGGLPANADSLLEKQRAKGLAVTIPGSEVLKLENNHSPEEQITEDLSTDDGLNSPVQIARECLPLVRSSEAGLPITPCKLEILKEGPGRNGRLKSIGKDQENGSGKREGPQDGSTSKRGAERQGEGCAGNGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLEDPASLAEQLVDTFSECVSNKRPSVVPAGFCMKLWH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1124 717 ProSiteProfiles Fibronectin type-III domain profile. 326 421 IPR003961 GO:0005515
Sto3g1124 717 MobiDBLite consensus disorder prediction 427 466 - -
Sto3g1124 717 MobiDBLite consensus disorder prediction 419 466 - -
Sto3g1124 717 Pfam PHD - plant homeodomain finger protein 121 240 IPR032881 -
Sto3g1124 717 CDD FN3 326 404 IPR003961 GO:0005515
Sto3g1124 717 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 717 IPR044514 GO:0010048|GO:0040029
Sto3g1124 717 MobiDBLite consensus disorder prediction 585 623 - -
Sto3g1124 717 MobiDBLite consensus disorder prediction 69 104 - -
Sto3g1124 717 Coils Coil 717 717 - -
Sto3g1124 717 CDD PHD_VIN3_plant 141 206 - -
Sto3g1124 717 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 717 - -
Sto3g1124 717 MobiDBLite consensus disorder prediction 585 615 - -
Sto3g1124 717 SUPERFAMILY Fibronectin type III 326 405 IPR036116 GO:0005515
Sto3g1124 717 Gene3D Immunoglobulins 318 427 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1124 Sto-Chr3 7956720 7959871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1124 1 467 PHD Gene Family AT4G30200 54.563 1.65e-162 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1124 - - gmx:100794721 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1124 3 7956720 7959871 Sto3g1124 3 7956720 7959871 ECH