Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1105 ATGGCCGTTTCCATGAAGGACTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAATTTCAAACCAGTTGCCATTCCAAAGTCCTCTTATGGGAAGTTTTTCACGGGTGATTCCTATGTGATCTTGAAGACAACCACTTCAAAAAGCGGTGCCCTGCGTCATGATATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACGGTTGAGCTGGATGCAGCTCTTGGGGGGCGTGCTGTTCAATATCGTGAGGTGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTACTTCAAACCTTGTATTATACCTCAGGAAGGTGGAGTTGCCTCTGGTTTTAAGCATGCTGAGGCTGAAGAATATAAGACACGGATGTTTGTATGCAAAGGAAAACATGTTGTACATGTCAAAGAGGTCCCTTTTGCCCGATCCTCACTAAACCATGatgatatatttatattggacACGAAGTCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAATATATTAAGGATACATATCATGATGGGAAATGTGAGGTAGCTGCTATTGAGGATGGAAAGCTGATGGCTGATTCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGTTTCGCTCCTCTTCCACGAAAACCAGCCAGTGATGATGATAATCATGTTGATTCTCATCCTCCAAAGCTGCTTTGCGTTGAAAAGGGGCAAGCTGAACCTATTAAGAATGATTCTCTGACAAGGGAGTTACTGGACACAAATAAATGCTATATTCTTGACTGTGGGCTGGAATTGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTGATCAGTGGCCCTGATCGACAGAAATCCCAAATAATTCGTGTTATTGAAGGATTTGAAACAGTGATGTTCAAGTCTAAGTTTGATTCTTGGCCTCAGACAACTGATGTAACTGTGTCTGAAGATGGCCGTGGAAAGGTTGCAGCACTTCTAAAACGCCAAGGAGTAAATGTTAAGGGTCTGCTAAAAGCTGATCCAGTTAAAGAAGAGCCTCAACCCTATATCGATTGTACAGGAAATTTGCAGGTTTGGCGTGTAAACGGTCAGGAAAAAGTTCTCCTTCCTGCTTCTGAGCAGTCAAAGTTTTATAGTGGAGATTGCTTCATCTTTCAATATTCATTTCCTGGAGAAGATAAGGAAGAGTATCTTATAGGAACGTGGATTGGAAAGAGTAGTGTTGAGGAAGAAAGAGCTTCAGCTATCTCATTGGCAAGCAAAATGGTCGAGTCAATGAAGTTTCTTCCTTCCCAGACCCGTATTTATGAAGGGAATGAGCCAATTCAGTTTCACTCTATCCTCCAAAGCTTGATTGTTTTTAAGGGTGGACTTAGTGATGGATACAAAAATTACACTGCGGAAAAGGAAATTCCTGATGAGACATACAATGAGGATGGTGTTGCACTGTTCCGCATCCAGGGCACTGGACCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCCTTGAACTCCAATTATTGCTACATACTTCATAATGGATCCACTGTCTTTACATGGACTGGAAACCTAACGACCTCTGACATCCAGGAACTTGTAGAGAGGATGTTGGATTTAATAAAGCCAAATTTACAATCCAAGCCACAAAAGGAAGGGTCAGAATCTGAACAGTTTTGGGATTTGTTAGGGGGGAAATCTGAATATTCTAGCCAGAAGATTGTGAGGACTGCAGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGAATATTTGCAGGTGACGGAGATATTCAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACTCTGACATCTTTGTCTGGGTTGGCCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATgattttcttttagaaaaagTATCTCGTGAAACTCCTATATACATTGTCATGGAAGGGAGTGAGCCACCTTTCTTCACTCGCTTCTTCGCATGGGAATCTGCAAAAAGTGCAatgcTGGGAAACTCATTTCAAAGGAAACTTACAATAGTGAAGAATGGGGGTACTCCAACTGTGGATAAACCCAAACGAAGAACACCAGCATCCTATGGGGGAAGATCTAGCAGTGTACCAGATAAATCCCAGCGTTCCCGCAGCATGTCCTTTAGTCCAGATCGTGTTCGTGTGCGGGGCCGGTCTCCAGCCTTCAATGCCTTAGCAGCTGCATTTGAGAACCCTAATGCTAGGAACCTTTCAACTCCGCCTCCAGTGGTTAGGAAACTGTATCCCAAATCTGTGACCCCAGATTCTGCAAAATCGGCGGCTCCAAAATCTGCTGCTATAGCAGCACTTAGTTCTAGCTTTGAACAACCACCTTCAGCACGGGATAGTATTATACCTCGGTCAGTTACAGTTAAAGTGAGTTCTGAGGCTTCCAAACCGAAGCCTGAGACAAACGACAAGGAGAATTCTATGAGCAGCAGAATAGAATCTCTTACCATACAAGAAGATGTGAAGGAGGATGAAGCTGAAGATGAGGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAACATCTACCGATCCTGTGACAGACATCGATGTGACTAAGCGAGAGACATATCTTTCGTCTGCTGAGTTCAAAGAGAAATTTGGGATGAAAAAGGATGCTTTTTACAAGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCCGTCCAGCTATTCTGA 2895 0.4242 MAVSMKDLDPAFQGAGQKAGLEIWRIENFKPVAIPKSSYGKFFTGDSYVILKTTTSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEEYKTRMFVCKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADSETGEFWGFFGGFAPLPRKPASDDDNHVDSHPPKLLCVEKGQAEPIKNDSLTRELLDTNKCYILDCGLELFVWMGRNTSLDERKSASGAADELISGPDRQKSQIIRVIEGFETVMFKSKFDSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKVLLPASEQSKFYSGDCFIFQYSFPGEDKEEYLIGTWIGKSSVEEERASAISLASKMVESMKFLPSQTRIYEGNEPIQFHSILQSLIVFKGGLSDGYKNYTAEKEIPDETYNEDGVALFRIQGTGPDNMQAIQVEPVASSLNSNYCYILHNGSTVFTWTGNLTTSDIQELVERMLDLIKPNLQSKPQKEGSESEQFWDLLGGKSEYSSQKIVRTAESDPHLFSCNFSKEYLQVTEIFNFSQDDLMTEDIFILDCHSDIFVWVGQQVDPKSRMQALTIGEKFLEHDFLLEKVSRETPIYIVMEGSEPPFFTRFFAWESAKSAMLGNSFQRKLTIVKNGGTPTVDKPKRRTPASYGGRSSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAAAFENPNARNLSTPPPVVRKLYPKSVTPDSAKSAAPKSAAIAALSSSFEQPPSARDSIIPRSVTVKVSSEASKPKPETNDKENSMSSRIESLTIQEDVKEDEAEDEEGLPVYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMKKDAFYKLPKWKQNKLKMAVQLF 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1105 964 MobiDBLite consensus disorder prediction 840 900 - -
Sto3g1105 964 SMART VILL_6 137 234 IPR007122 GO:0051015
Sto3g1105 964 SMART VILL_6 392 489 IPR007122 GO:0051015
Sto3g1105 964 SMART VILL_6 622 719 IPR007122 GO:0051015
Sto3g1105 964 SMART VILL_6 519 606 IPR007122 GO:0051015
Sto3g1105 964 SMART VILL_6 254 344 IPR007122 GO:0051015
Sto3g1105 964 SMART VILL_6 19 117 IPR007122 GO:0051015
Sto3g1105 964 SUPERFAMILY VHP, Villin headpiece domain 889 964 IPR036886 GO:0003779|GO:0007010
Sto3g1105 964 PANTHER VILLIN 1 964 IPR007122 GO:0051015
Sto3g1105 964 MobiDBLite consensus disorder prediction 755 775 - -
Sto3g1105 964 SMART VHP_1 929 964 IPR003128 GO:0003779|GO:0007010
Sto3g1105 964 CDD gelsolin_S6_like 621 719 - -
Sto3g1105 964 CDD gelsolin_S5_like 517 608 - -
Sto3g1105 964 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Sto3g1105 964 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Sto3g1105 964 ProSiteProfiles Headpiece (HP) domain profile. 899 964 IPR003128 GO:0003779|GO:0007010
Sto3g1105 964 Gene3D Severin 521 612 IPR029006 -
Sto3g1105 964 Gene3D Severin 613 733 IPR029006 -
Sto3g1105 964 Gene3D Severin 380 520 IPR029006 -
Sto3g1105 964 Gene3D Severin 248 356 IPR029006 -
Sto3g1105 964 Pfam Gelsolin repeat 150 216 IPR007123 -
Sto3g1105 964 Pfam Gelsolin repeat 641 712 IPR007123 -
Sto3g1105 964 Pfam Gelsolin repeat 270 337 IPR007123 -
Sto3g1105 964 Pfam Gelsolin repeat 408 482 IPR007123 -
Sto3g1105 964 Pfam Gelsolin repeat 29 111 IPR007123 -
Sto3g1105 964 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Sto3g1105 964 Gene3D Villin headpiece domain 902 964 IPR036886 GO:0003779|GO:0007010
Sto3g1105 964 SUPERFAMILY Actin depolymerizing proteins 595 716 - -
Sto3g1105 964 Gene3D Severin 6 132 IPR029006 -
Sto3g1105 964 CDD gelsolin_S3_like 254 343 - -
Sto3g1105 964 PANTHER VILLIN-3-LIKE 1 964 - -
Sto3g1105 964 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 252 425 IPR036180 -
Sto3g1105 964 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Sto3g1105 964 CDD gelsolin_S4_like 386 485 - -
Sto3g1105 964 CDD gelsolin_S1_like 12 124 - -
Sto3g1105 964 Pfam Villin headpiece domain 929 964 IPR003128 GO:0003779|GO:0007010
Sto3g1105 964 MobiDBLite consensus disorder prediction 739 781 - -
Sto3g1105 964 Gene3D Severin 133 247 IPR029006 -
Sto3g1105 964 SUPERFAMILY Actin depolymerizing proteins 129 246 - -
Sto3g1105 964 CDD gelsolin_S2_like 138 217 - -
Sto3g1105 964 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1105 Sto-Chr3 7792530 7803061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1105 - - gmx:100808499 1663.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1105 3 7792530 7803061 Sto12g1188 12 7552138 7553754 CCT
Sto12g1356 12 8993420 9009372 Sto3g1105 3 7792530 7803061 CCT
Sto3g1105 3 7792530 7803061 Sto3g1105 3 7792530 7803061 ECH