Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1103 atggCATCATCAACATCAAGTGTAAGGTTGAAAGGCAAGTTGAGCGTGAAGCCTTGTGATCCAACATGGAAGGGAAGCATGGGGTTATCTGAATTGGACCAAATAGGCATATTGACGCACGTGACCTCCATCTACCTTTATCATCCTAATAATTCACACACTCATTTTGCTCACACCCTCAAGACCTCACTAAGCAAAGCCTTGGTGCCGTTTTACCCACTAGCTGGTCGTTTACACTGGATAGGCAATAATAATGGTCGTCTTGAGCTTCAGTGCAATGCCATGGGGGCCCAATTCATTGAAGCAGAGTGTGAATCAAGGCTGGATGACCTGATTGCTCATGACTTGGCTTCTTCTCCACCGTACGATCAGCTTTTCCCACAAATAGACTATACCCTCCCACTTCATCACTTGCCTCTGCTTCTGGTTCAGCTTACCAGCTTCAAGTGTGGTAGCCTCACCATTAGCCTAGCAATTTCACACGCAGTTGTCGATGGACCAGGTTCCCAACACTTCATATCAGAGTGGGCTAGACTTGCACGAGGTGAGCCTTTGCAAATAATGCCATTTCATGACCGAACCGTCTTGCAATCCAGGGACCCACCACCAACTTCACTACCACCATGCCTTGACCACTCTGAACGCAATCCTCCCCCTTTATTACTCGGCCATTCCGATAGCACACAGGAAAGAACCAAGAAAACCACAATGGCTACgctcaaaataaccaaagccCAAGTTGAGGCACTCAGGAAAACGGCCAATGAATCTTGGGCTTGTGATCCCAAGCCCATGGGCCGCAGGTACACTCGGTACGAGTCCATAACAGCCCATATATGGAGAAGCACGTGCAAAGCGAGAGGGCACAAAAAGGAGCAACCAACCGGATTAGGAGTTTCCGTCGACTTGAGGAGTCGCATGAGGCCCCCACTTCCGAAAGAGTATTTTGGCAACGCAATTCTAGATGTCGTCGCTACAAGTCTCGCGGGCGATTTGGTGTCAAAGCCGTTAGGGTATGGTGCGAGCAAGATAAGGGAAGTGATAGAGAAGGTGACGGACGAGTACGTGAGGTTAGGGATAGAGCTGTTGAAGAAGGAAGAGGATTTGACGATGTTTCAAGATATTCACGCGATTTCCAGTGATGAAAAAGGGCCATTTTATGGGAACCCCAATCTTGCCGTGACGAGTTGGCTAACGTTGCCTATACATGGGTTCGATTTTGGGTGGGGAGAAGAATTTCACATGGGGTTGGGACCCCATGGGTTAGATGGGAGCATTTCGATTTTTCACAGTCGCGATGGAGATGCCTCTGTGGAAGTCGTTTTGTACTTGCAAGAACTTCATATGGATGCGTTTAAGAAGCATTTTTATGAAGACATGATGATGTGA 1389 0.4723 MASSTSSVRLKGKLSVKPCDPTWKGSMGLSELDQIGILTHVTSIYLYHPNNSHTHFAHTLKTSLSKALVPFYPLAGRLHWIGNNNGRLELQCNAMGAQFIEAECESRLDDLIAHDLASSPPYDQLFPQIDYTLPLHHLPLLLVQLTSFKCGSLTISLAISHAVVDGPGSQHFISEWARLARGEPLQIMPFHDRTVLQSRDPPPTSLPPCLDHSERNPPPLLLGHSDSTQERTKKTTMATLKITKAQVEALRKTANESWACDPKPMGRRYTRYESITAHIWRSTCKARGHKKEQPTGLGVSVDLRSRMRPPLPKEYFGNAILDVVATSLAGDLVSKPLGYGASKIREVIEKVTDEYVRLGIELLKKEEDLTMFQDIHAISSDEKGPFYGNPNLAVTSWLTLPIHGFDFGWGEEFHMGLGPHGLDGSISIFHSRDGDASVEVVLYLQELHMDAFKKHFYEDMMM 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1103 462 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 11 460 - -
Sto3g1103 462 SUPERFAMILY CoA-dependent acyltransferases 110 185 - -
Sto3g1103 462 Pfam Transferase family 8 458 - -
Sto3g1103 462 MobiDBLite consensus disorder prediction 196 233 - -
Sto3g1103 462 Gene3D - 3 216 IPR023213 -
Sto3g1103 462 Gene3D - 224 459 IPR023213 -
Sto3g1103 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1103 Sto-Chr3 7781055 7783057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1103 8 458 Monolignol Biosynthesis Gene Families AT5G48930 35.982 4.10e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1103 K13065 - gmx:100777532 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1103 3 7781055 7783057 Sto3g1103 3 7781055 7783057 ECH