Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1098 ATGTCAATGTTGATGAACATAACTCCACAGAAAGCAGTAATAGCAGAAACAGGAGAGATGGTGGGGGTTGAGGAAGTTGAAGTGAACACAATCTTGGCCGTTAAAGCAGGGGAAGTGATACCCATTGATGGAATAGTTGTGGATGGAAGGTGTGAAGTGGATGAGAAAACTCTGACTGGGGAGTCATTCCCAGTTCCCAAACAGAAGGACTCTGTTGTGTGGGCTGGAACCATTAATTTAAATGGTTATGTTAGTGTGAAAACTAATGCACTGGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACAAGCACACAGAGATTGATTGACCATTTTGCCAAGCCTTTACTCTTGTTAATGTTTGCAGCTGTGGTAGTCATATCAGCCCTCACAGCAGTGATTCCTATTGCATTGAGAGTACACAATGAGAAGCAATGGGTTCAACTTGCCCTTGTTGTTCTAGTAAGTGCATGCCCATGTGCCCTCATCCTTTCTACACCAGTTGTAACTTTCTGTGCTTACACAAAAGCAGCTACTTCTGGTCTTCTCATCAAAGGGGGTGATCATCTTGAAACCCTATCCAAAATTAAGGTCATGGCTTTTGATAAAACCGGCACTATTACAAAGGGTGAATTTCTGGTCACAAGTTTCCAATCTCTTTCTCATGATGTTGATTTGAACGCTTTGCTTTACTGGGTCTCAAGCATTGAAAGCAAGGCAAGCCATCCTCTAGCAGCAGCCGTTATTGAGTATGCAAAGTCAATGAATATTGAACCAAAGCCAGAAAAAGTGGTAGATTTTGAGAATTTTCCCGGAGAAGGCATTCGTGGAAAAATTGATGACAGAGATATTTAcattggaaataaaaaaattgccaCAAGAGCCGGGTCTGGAACAGTTCCTACCTTAGAAGATGGCTCTCAAGGAGGAAAGACTACTGGCTACATATATTCTGGAGCAACCCCAATTGGATTTTTCTCTCTCACAGATGCTTGTAGAACTGGGGCCCAGGAGGCAATAGACCAATTGAAGTTATTGGGTATCAAAACTGCTATGCTCACTGGAGATAGTCAAGCAGCTGCTGTGCAAGCACAAGAGcagCTAGGGCATGCTTTGGATCTAGTCCATGCTGAACCTCTACCAGAAGGCAAAGCAAAAATCCTCACAGAATTCAAAAACGAAGGACGGACCGCCATGGTTGGAGATGGCCTGAACGATGCACCGGCATTAGCTACAGCTGATATTGGAATTTCAATGGGCATTTCAGGTTCATCACTAGCAAGTGAGACAGGCAATATTATCCTCATGTCAAATGACCTTAGGAAGATACCACTAGCCATCAAGCTTGCTAGAAAATCTCATAGGAAAGTAATAGAAAATGTTGTATTGTCTGTGATTACTAAGGCTGCAATTCTTGGCTTGGCTTTTGCTGGTCATCCTCTTGTTTGGGCAGCCGTTCTTGCTGATGTTGGAACATGCTTGTTGGTTATCTTAAACAGTATGCTTCTTCTGCGTAAAGGACACAAGCATGGAGGGAAATGTTGTGCATCTTCTGCTCAGAGACACATGCATAAAGGTGGATGTAGTGCTGGTAATGGAAAATGTTCTGATAATCATGATCATGATCATGGTCATGGGAAATGTTGTGCATCTTCCGCTCAAGGACACATGCATAAAAGTGGATGTAATGCTGGTGATGGAAAATGTTCTGATCATCATGGTCATGGTCATGGTCATGGTCATGATCATGGAAAATGTTGTGCATCCTCTGCTCCAGGACACATGCATAAAACTGGATGTAATGCTGAACACATGCATAAAAGTGGATGTAATGCTGGTGATGGAAAATGTTCTGATCACCATGATCATGGAAAATGTTCTGATCACCATGATCATGGAAAATGTTGTGCATCTTCTGGCCAAGGACACAAGCATCAAAGTGGATGTAATGCTAGTGATGGCAAGTGTTGTCATGATCATGGTCATGGTGATGGTAAGTGTGGAAGTGCAAAAGAGAGTTTTGATGAAGTTGAGCATGAAAATGCAGGGACTGAATCTGATCTGAACAAGTGTGGGGAAGATCACATTTCTATTGAGATAGAGTCAAAGCATGGTTGTGATAAAGTGAGTGGATGTTGTAAGGCGTCTTCACAAAAATCCTTGGAGTTTACAAGTGCAAGAGAAAGTGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGATAGACATGGACATTTAGGGGCTGCTGGTCTTCCAGCTTTATCTGAAATTGTTATAGAACAAGTTTAG 2319 0.4209 MSMLMNITPQKAVIAETGEMVGVEEVEVNTILAVKAGEVIPIDGIVVDGRCEVDEKTLTGESFPVPKQKDSVVWAGTINLNGYVSVKTNALAEDCVVAKMAKLVEEAQNSKTSTQRLIDHFAKPLLLLMFAAVVVISALTAVIPIALRVHNEKQWVQLALVVLVSACPCALILSTPVVTFCAYTKAATSGLLIKGGDHLETLSKIKVMAFDKTGTITKGEFLVTSFQSLSHDVDLNALLYWVSSIESKASHPLAAAVIEYAKSMNIEPKPEKVVDFENFPGEGIRGKIDDRDIYIGNKKIATRAGSGTVPTLEDGSQGGKTTGYIYSGATPIGFFSLTDACRTGAQEAIDQLKLLGIKTAMLTGDSQAAAVQAQEQLGHALDLVHAEPLPEGKAKILTEFKNEGRTAMVGDGLNDAPALATADIGISMGISGSSLASETGNIILMSNDLRKIPLAIKLARKSHRKVIENVVLSVITKAAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRKGHKHGGKCCASSAQRHMHKGGCSAGNGKCSDNHDHDHGHGKCCASSAQGHMHKSGCNAGDGKCSDHHGHGHGHGHDHGKCCASSAPGHMHKTGCNAEHMHKSGCNAGDGKCSDHHDHGKCSDHHDHGKCCASSGQGHKHQSGCNASDGKCCHDHGHGDGKCGSAKESFDEVEHENAGTESDLNKCGEDHISIEIESKHGCDKVSGCCKASSQKSLEFTSARESGGCCKSYMKECCDRHGHLGAAGLPALSEIVIEQV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1098 772 PRINTS H+-transporting ATPase (proton pump) signature 409 425 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1098 772 PRINTS H+-transporting ATPase (proton pump) signature 441 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1098 772 SUPERFAMILY Calcium ATPase, transmembrane domain M 105 203 IPR023298 -
Sto3g1098 772 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 7 486 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1098 772 SFLD C1.7: P-type atpase like 192 461 - -
Sto3g1098 772 SUPERFAMILY Calcium ATPase, transduction domain A 19 104 IPR008250 -
Sto3g1098 772 ProSitePatterns Hypothetical cof family signature 2. 409 431 - -
Sto3g1098 772 ProSitePatterns E1-E2 ATPases phosphorylation site. 211 217 IPR018303 -
Sto3g1098 772 Gene3D - 200 460 IPR023214 -
Sto3g1098 772 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 2 514 - -
Sto3g1098 772 PRINTS P-type cation-transporting ATPase superfamily signature 54 68 - -
Sto3g1098 772 PRINTS P-type cation-transporting ATPase superfamily signature 209 223 - -
Sto3g1098 772 PRINTS P-type cation-transporting ATPase superfamily signature 355 365 - -
Sto3g1098 772 PRINTS P-type cation-transporting ATPase superfamily signature 409 428 - -
Sto3g1098 772 PRINTS P-type cation-transporting ATPase superfamily signature 433 445 - -
Sto3g1098 772 Gene3D - 1 108 - -
Sto3g1098 772 SUPERFAMILY HAD-like 208 510 IPR036412 -
Sto3g1098 772 Gene3D - 220 341 IPR023299 GO:0000166
Sto3g1098 772 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 588 - -
Sto3g1098 772 Pfam haloacid dehalogenase-like hydrolase 205 423 - -
Sto3g1098 772 CDD P-type_ATPase_HM 1 511 - -
Sto3g1098 772 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 1 588 - -
Sto3g1098 772 Pfam E1-E2 ATPase 15 187 - -
Sto3g1098 772 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 2 512 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto3g1098 772 SFLD p-type atpase 192 461 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1098 Sto-Chr3 7744226 7748090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1098 1 770 Primary Pumps ATPases AT4G30110 54.131 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1098 K01534 - gmx:100817567 896.73