Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1066 ATGGGGAACTGTTGGGTTCGTCAATCAGCTTCTCCAAGTGGTCATCCCAACTCCATCACTGCTGGCAACAGCAACCAATTGAGGAGCACTTCTGTTAGAAACAGTAATTCAAGACTATTGCATAGTACAAGCAATTCTGGTTTGCTTGGACGGAACAGTTTCTCTGCTGGTAATAGCCGGCTATTTGGGCCAAGTAGCAGTAATACATACACAACCAGCAATACTAGTACATCTTTTTTGGGCTCTGATATCAGTCGAGCCCTTCAAGCAAGAGGTGAAGAGGAATTTCCTAATGGGCAGATCTTGGACGTGCCAAACTTGAGAGCTTTCACTTTTGAAGAACTCAAGGCAGCAACTAGAAATTTCAGAGCCAATATGGTGGTCGGAGAGGGTGGTTTTGGCAGAGTGTATAAGGGTTTTCTTAAAGACAGGGGAGCATCATCAAATAGAGATGGGGGATCGGTTATCGccatcaagagattgaattcTCAAGGCTTCCAAGGATTTGTGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTAAAGTTGTACGGATTTGGAAGGGAAGATGGGGAGCTACTCCTGGTGTACGAATTTCTGCACAAGGGCAGCTTGGCCAATCAGCTATTCGGAAGAGGTTCAAATGTACAGCCACTTTCATGGGACACGAGGTTAAAGATTGTGATAGGAGCAGCTAGGGGCCTTGCTTTCCTACACTCGTTAGAGAACAGTATCATATACAGAGATCTTAAGCCATCAAATATCCTACTTGACAAGCACTACACAGCGAAGCTATCAGACTTTGGTTTGGCTAGAGATGGTCCTTCGGGTGATAGAACTCATGTTTCAACACAAATAATGGGAACCAACGGGTATGCAGCGCCGGAGTATATTATGACAGGACACCTGTCTGTGAAAAGCGATGTGTATGGATTTGGAGTTGTTTTGGTGGAGACACTCACTGGAAAAGCAATACATGATATAAATCGTATCTGCAAGGAACAATCATTAACTGATTGGATCAAATCAAATCTATTGAGTAGAAGGATGAGAAACACAATGGACAGCCGATTGGAGGGGAAATATCCACCCAAGTTAGCATCACAATTAGCTCAACTTGCTCTTAAATGTGTTCGAATGGAATATAAACTCAGGCCATCAATGACAGAAGTGGTTGAAACATTGGAACAAGTACAAGCAGCAAATAACAAAACAACTGATAAAAGAAAGCTCTCTACTCATTCTGGGGCACCTCAACTTCATAGCCGGCCAGATGGAGGTTAA 1305 0.4291 MGNCWVRQSASPSGHPNSITAGNSNQLRSTSVRNSNSRLLHSTSNSGLLGRNSFSAGNSRLFGPSSSNTYTTSNTSTSFLGSDISRALQARGEEEFPNGQILDVPNLRAFTFEELKAATRNFRANMVVGEGGFGRVYKGFLKDRGASSNRDGGSVIAIKRLNSQGFQGFVEWQSEVNFLGRLSHPNLVKLYGFGREDGELLLVYEFLHKGSLANQLFGRGSNVQPLSWDTRLKIVIGAARGLAFLHSLENSIIYRDLKPSNILLDKHYTAKLSDFGLARDGPSGDRTHVSTQIMGTNGYAAPEYIMTGHLSVKSDVYGFGVVLVETLTGKAIHDINRICKEQSLTDWIKSNLLSRRMRNTMDSRLEGKYPPKLASQLAQLALKCVRMEYKLRPSMTEVVETLEQVQAANNKTTDKRKLSTHSGAPQLHSRPDGG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1066 434 SUPERFAMILY Protein kinase-like (PK-like) 106 404 IPR011009 -
Sto3g1066 434 SMART serkin_6 122 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1066 434 MobiDBLite consensus disorder prediction 409 434 - -
Sto3g1066 434 MobiDBLite consensus disorder prediction 409 426 - -
Sto3g1066 434 CDD STKc_IRAK 128 404 - -
Sto3g1066 434 Pfam Protein kinase domain 125 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1066 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Sto3g1066 434 Gene3D Transferase(Phosphotransferase) domain 1 207 425 - -
Sto3g1066 434 ProSitePatterns Protein kinases ATP-binding region signature. 128 159 IPR017441 GO:0005524
Sto3g1066 434 Gene3D Phosphorylase Kinase; domain 1 94 206 - -
Sto3g1066 434 PANTHER OS01G0588500 PROTEIN-RELATED 30 434 - -
Sto3g1066 434 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 30 434 - -
Sto3g1066 434 ProSiteProfiles Protein kinase domain profile. 122 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1066 434 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1066 Sto-Chr3 7468761 7471023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1066 108 406 Receptor kinase-like Gene Family AT4G02010 47.855 1.38e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto3g1066 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1066 - - gmx:100813304 532.332