Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1061 ATGGCCACTGAAACCATTATGGCCATAGCTAGTAATCAATATTATGAAACCATAGCTTTCTTAGGCTGCCATGAAAACTTGCTCGATCAGTTATATGGCATTGCTATACCTTACTTGAATATTGTGGAACCCAAAAGTTATAATAAAGCAAATAGAATAGATGCCGCCATTATTGTAATCGGTATTTATCTCGAGGAACTACCCCTGGGCAATCCTTTTGAAAATAAAGGAAAACGAAGGCGGAAAAGGAAGAAGAACCAAACTACAAACTACAATACTGTAAAGGATCAGTTTGTTGTTAAATTGAAAGGGCGGATTTGCCGATTTATAGGTGCTTACTTGGAATATTTTGtggttttggttttaatttCGTTTTCAGACATTTTCGGAACTATGAGTTTCTTGAAGAATTCACCTCGCCGCCTGAGTGACATAGAGGCAGCAAGTAGCAGCTCCGGCGATTGTGACGAAGTTGATAGTTCGTCTGATCCATTTGGTATTACCAGAACAAAGAATGCTCCAATTGAACGCCTCAAACGTTGGAGGAGTGAGTTTCAAGTGTTTCACCTTCTTTCTGTAAATATGGTTGAATTTAGGATGCAAGCTGCACTTGTGCTTAATGCTTCTCGTCGATTCCGTTACACCTTGGacttgaaaaaagaagaagaaaagcggCAAATATTGAGGAAGATCAGGGCTCATGCACAAGCTATCAGAGCTGCATATCTTTTTAAGGAAGCTGCTGCAAAGCAGGTGAATGgGTTAGGAACCACATCACCTCCTCCAAACCCCCTTGGTGATTTTGCTATTGGACAAGACCAACTTGTTTCAATTTCAAGGGATCATAATATTGAAGCTCTGCAGCAATATGGAGGGGCTAGAGGGCTATCAGATTTGTTGAAATCCAATATAGAGAAAGGGATTCATGGTGATGATGCAGATTTAGGAAAACGGAGGAATGCCTTTGGTTCCAACAATTATCCTCGAAAGAAAGGAAGGAGttttttgCTGTTTATGTGGGATGCTTGCAAGGATCTGACTTTGGTTATATTAATGGTAGCAGCAGCAGCTTCGTTAGCACTGGGAATAAAATCTGAGGGTATAAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTAATTCTTGTTATTGTTGTTACAGCCATAAGCGATTATAAGCAGTCTCTTCAGTTTCGAGATCTAAATGAGCAGAAGAGAAATATACATTTAGagGTTATAAGAGGGGGTAGAAGAGTTGAGATCTCAATATATGATATTGTTGTTGGTGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATACTGATCACTGGTCACTCTCTTGCTATTGATGAATCAAGTATGACCGGGGAGAGCAAGATTATTTATAAAGATTCTAAGGACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGTAGTGGCACTATGCTGGTAACCAGTGTTGGTATAAATACTGAATGGGGGCTTTTGATGTCTAGTATTTCAGAAGACAATGGCGAAGAAACACCCTTGCAGGTACGTTTGAACGGCGTTGCCACTTTCATTGGTATTGTTGGACTCTCTGTTGCTGTTGCTGTGCTGATTGTACTGCTGGCCAGATATTTCTCTGGGCATACTAGAAACACAGATGGAAGTGTTCAATTTGTGGCAGGCAAGACAACAGTCAGTCATGCTATTGATGGAGCAATTAAGATAATCACAGTTGCAGTGACCATTGTAGTGGTTGCAGTGCCTGAAGGGCTCCCTTTAGCAGTTACCTTAACACTTGCCTATTCAATGAGAAAAATGATGGCAGACAAAGCTTTGGTGAGGAGGCTTTCGGCCTGTGAGACAATGGGCTCTGCCACTACCATTTGCAGTGATAAGACTGGAACTTTGACTATGAATCAGATGACTGTGGTTGAGGCTTACAGTGGTGGGAAGAAGATTGAACCTCCTGACAACAAGGCAGAGCTCTCTCCAAATCTTTGCACTCTGATCCTTGAAGGTATTGCACAGAACAGCAATGGCAGTGTTTATATGCCTGAGGGTGGCACTGACATTGAGGTTTCTGGATCACCAACTGAAAAGGCAATCTTACATTGGGGAATCAAGCTGGGGATGAATTTTGAGGCTGTCAGATCAGAGTCATCAATTATTCATGTCTTTCCATTTAATTCAGATAAAAAACGTGGTGGAGTTGCTGTACAGACGCCTGACTCTCAAGTTCATATACATTGGAAGGGTGCTGCTGAGATAGTCCTAGCCTGTTGTACAGCATATATTGATATAAATGGCCAGATACTGGAGATGGATGAAGAAAAGatgacatattttaaaaaagctATTGAAGATATGGCAGCTGATAGTCTACGTTGTGTTGCCATTGCATATAGATTATATGAAATGGAGAAAGTTCCAACTAGTGAAGAAGAACTTGTTCACTGGGCATTGCCGGAGAGTGATCTTGTTTTACTGGCTATTGTTGGTTTGAAGGATCCTTGTCGACCTGGTGTCAAAAATGCAGTACAACTTTGCCAAAAAGCTGGAGTTAAGGTACGAATGGTCACTGGTGACAATGTGAAAACTGCAAAATCAATTGCTGTGGAATGTGGAATACTTAGTTCGTTTGCGGATGCCACTGAGCCAAACATCATTGAAGGTCGTGCATTTCGAGCTTTGTCAGATGCACAGAGAGAAGATATTGCTGAAAGAATATCgGTTATGGGACGGTCATCTCCCAATGACAAGCTTTTGCTTGTGCAAGCGTTGAGGAGGAAGGGGCATGTTGTGGCTGTAACTGGAGATGGAACTAATGATGCTCCTGCACTACATGAGGCCGACATAGGTCTTGCAATGGGTATTCAAGGGACTGAAGTTGCTAAAGAGAGCTCAGATATCATTATTTTGGATGACAATTTTGCTTCGGTTGTGAAGGTTGTCAGATGGGGACGGTCTGTATATGCAAATATTCAGAAATTTATCCAATTCCAACTCACAGTTAACGTTGCTGCTCTTGTTATTAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTCCCGTTAAATGCTGTACAGCTTCTCTGGGTAAACCTTATCATGGATACACTTGGAGCATTAGCCTTAGCAACTGAACCCCCCACTGATCATTTGATGGATCGGCCTCCAGTAGGTCGAAGGGAACCTCTCATAACAAACATTATGTGGAGGAATCTGCTAATACAAGCAATGTATCAAGTGTCTGTTTTGCTTGTACTGAATTTCCGAGGTAGGAGCTTACTGGGACTGAAACATAACCCCAACGACCATGCTATTAAAGTGAAGAACACTTTAATATTCAATTCATTTGTTCTCTGTCAAATCTTTAatgaatttaatgctcgaaagcCAGATGAATTCAACATATTCAAGGGAGTCACAAAAAACTACCTCTTTATGGGGATAGTGGGATTAACTCTCGTGCTTCAGattctCATCATTGAATTTCTGGGGAAGTTCACTTCAACAGTGAGGCTTAACTGGAAGCAATGGCTCATTTCTGTTGTCATTGGCTTTATCAGGATCTCACCCTCCACTGcccttctcttttccttatgtCTTAGCTGGCCTCTTGCTGTGCTTGGGAAATTGATACCTGTACCGGAGACTCcattaaaaatgttttttacAAGATCTCATGGAAGAAATTCAAGCAAGGAACCTGAGTCTTCTCCTCAATAG 3738 0.4037 MATETIMAIASNQYYETIAFLGCHENLLDQLYGIAIPYLNIVEPKSYNKANRIDAAIIVIGIYLEELPLGNPFENKGKRRRKRKKNQTTNYNTVKDQFVVKLKGRICRFIGAYLEYFVVLVLISFSDIFGTMSFLKNSPRRLSDIEAASSSSGDCDEVDSSSDPFGITRTKNAPIERLKRWRSEFQVFHLLSVNMVEFRMQAALVLNASRRFRYTLDLKKEEEKRQILRKIRAHAQAIRAAYLFKEAAAKQVNGLGTTSPPPNPLGDFAIGQDQLVSISRDHNIEALQQYGGARGLSDLLKSNIEKGIHGDDADLGKRRNAFGSNNYPRKKGRSFLLFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEQKRNIHLEVIRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIIYKDSKDPFLMSGCKVADGSGTMLVTSVGINTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLSVAVAVLIVLLARYFSGHTRNTDGSVQFVAGKTTVSHAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYSGGKKIEPPDNKAELSPNLCTLILEGIAQNSNGSVYMPEGGTDIEVSGSPTEKAILHWGIKLGMNFEAVRSESSIIHVFPFNSDKKRGGVAVQTPDSQVHIHWKGAAEIVLACCTAYIDINGQILEMDEEKMTYFKKAIEDMAADSLRCVAIAYRLYEMEKVPTSEEELVHWALPESDLVLLAIVGLKDPCRPGVKNAVQLCQKAGVKVRMVTGDNVKTAKSIAVECGILSSFADATEPNIIEGRAFRALSDAQREDIAERISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSLLGLKHNPNDHAIKVKNTLIFNSFVLCQIFNEFNARKPDEFNIFKGVTKNYLFMGIVGLTLVLQILIIEFLGKFTSTVRLNWKQWLISVVIGFIRISPSTALLFSLCLSWPLAVLGKLIPVPETPLKMFFTRSHGRNSSKEPESSPQ 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1061 1245 Gene3D - 643 841 IPR023299 GO:0000166
Sto3g1061 1245 Gene3D - 314 509 - -
Sto3g1061 1245 Gene3D - 341 1193 - -
Sto3g1061 1245 PANTHER CATION TRANSPORTING ATPASE 154 1235 - -
Sto3g1061 1245 Pfam haloacid dehalogenase-like hydrolase 630 955 - -
Sto3g1061 1245 Gene3D - 630 986 IPR023214 -
Sto3g1061 1245 SFLD C1.7: P-type atpase like 615 993 - -
Sto3g1061 1245 SMART Cation_ATPase_N_a_2 292 363 IPR004014 -
Sto3g1061 1245 SUPERFAMILY Calcium ATPase, transduction domain A 411 506 IPR008250 -
Sto3g1061 1245 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 283 1194 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto3g1061 1245 SFLD p-type atpase 615 993 IPR044492 -
Sto3g1061 1245 SUPERFAMILY Calcium ATPase, transmembrane domain M 291 1194 IPR023298 -
Sto3g1061 1245 PRINTS Sodium/potassium-transporting ATPase signature 376 396 - -
Sto3g1061 1245 PRINTS Sodium/potassium-transporting ATPase signature 626 647 - -
Sto3g1061 1245 PRINTS Sodium/potassium-transporting ATPase signature 752 770 - -
Sto3g1061 1245 ProSitePatterns E1-E2 ATPases phosphorylation site. 635 641 IPR018303 -
Sto3g1061 1245 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 569 664 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1061 1245 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 908 1021 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto3g1061 1245 CDD P-type_ATPase_Ca_PMCA-like 317 1074 - -
Sto3g1061 1245 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 640 838 IPR023299 GO:0000166
Sto3g1061 1245 PANTHER CALCIUM-TRANSPORTING ATPASE 154 1235 - -
Sto3g1061 1245 Pfam Cation transporter/ATPase, N-terminus 292 358 IPR004014 -
Sto3g1061 1245 Pfam E1-E2 ATPase 411 611 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 457 471 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 633 647 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 834 845 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 856 866 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 941 960 - -
Sto3g1061 1245 PRINTS P-type cation-transporting ATPase superfamily signature 965 977 - -
Sto3g1061 1245 Pfam Ca2+-ATPase N terminal autoinhibitory domain 201 223 IPR024750 GO:0005516
Sto3g1061 1245 SUPERFAMILY HAD-like 631 1046 IPR036412 -
Sto3g1061 1245 Gene3D - 196 247 - -
Sto3g1061 1245 Pfam Cation transporting ATPase, C-terminus 1026 1192 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1061 Sto-Chr3 7406608 7430159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1061 133 1239 Primary Pumps ATPases AT5G57110 71.634 0.0 1601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1061 K01537 - gmx:100792945 1733.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1061 3 7406608 7430159 Sto3g1061 3 7406608 7430159 ECH