Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1050 ATGTCTGCGTGTTTAAGCGGAGCTAGTGGAGGAAGAACCTACGGGTTCGACTTCGATTTCGTCAAATCTCCAACTTCATTATCATCCACCCCAACTTCCCAcacatcttctccttcttcaacCATCTCCGAATCCAGCGACTCCCCACTCGCAATCTCCACCCGAAAACCTCGAACCCCTCGGAAGCGACCCAACCAAACCTACAACGAAGCTGCTGCAATGCTTTCCACAGCATACCCAAACCTCTTCCCCACCGACACCCTCAAAAAACCGCCGCCAAAATTCATCACCAGACCCACCGATACCAATTCTAATTGGGACGAATCTTCCCAATTGATTTTGCCTTTCCCAGTCTTCTTCGATACTCCTTCTTTCTTGCTCCAACATAAGCCCAGTGATTTCCCAATGGAGCCCAAAGCGGTTAATATTCTGCAAGAGAAGCCGTGCCAGAGCCCAGGCGAAATCAGCTCGCACAATACTACTACTATGGAATTCCACGACGATTGCCAGCTTCAAGATTTCGACGCGGAATCGATTCTCGACGAGGAAATCGGCGAGGGAATCGATAGCATCATGGGGAGCTGCAGAGCGGAGGATTCCAACGGCGCGTCTTGTCACGGCGAACGCGTGAATCCTTGGATTAATAATGAGGATTCGATTGGCGGGAAATTCGATTTCCGAATTAGGGCTCTACGGCGGGTGGATGAAGGGTATTGGTGGAATTTTCCTGCGGTGGTTGATATGCTTGAAATCTCGCCCAAAATAGAAAAGCCTCCTGcgttggagaagaagaagaagacgaagacgaAGACGAAGAAGGTCGATAAGCTGACGCCGACGCCGATGAGCGTGGAGCCGAAGAACACGGAATTGCCGAGAGAGAGTTCGATTCCGAAATCATCAAATCCTGGGTTGCTGTTGAAATTGAATTACAACGGGGTTTTGAATGCTTGGTCTGACCGGGGTTCACCTTTCGCCGGCGAAACTCCGGGATCCGATGTCCCCGGAAATGACGTCACTGCCCGGCTGGCGCAGATAGATTTGTTCTCAGACAacggtggagttatgagagaagCCAGCGTATTGCGCTACAAAGAAAAACGCCGTACTCGCCTCTTCTCCAACTCTAAGAAGATCAGATATCAGGTCAGAAAAGTCAACGCTGATACACGCCCCAGATTGAAGGTATGA 1191 0.4744 MSACLSGASGGRTYGFDFDFVKSPTSLSSTPTSHTSSPSSTISESSDSPLAISTRKPRTPRKRPNQTYNEAAAMLSTAYPNLFPTDTLKKPPPKFITRPTDTNSNWDESSQLILPFPVFFDTPSFLLQHKPSDFPMEPKAVNILQEKPCQSPGEISSHNTTTMEFHDDCQLQDFDAESILDEEIGEGIDSIMGSCRAEDSNGASCHGERVNPWINNEDSIGGKFDFRIRALRRVDEGYWWNFPAVVDMLEISPKIEKPPALEKKKKTKTKTKKVDKLTPTPMSVEPKNTELPRESSIPKSSNPGLLLKLNYNGVLNAWSDRGSPFAGETPGSDVPGNDVTARLAQIDLFSDNGGVMREASVLRYKEKRRTRLFSNSKKIRYQVRKVNADTRPRLKV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1050 396 MobiDBLite consensus disorder prediction 25 65 - -
Sto3g1050 396 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 395 - -
Sto3g1050 396 MobiDBLite consensus disorder prediction 260 299 - -
Sto3g1050 396 PANTHER OS02G0148000 PROTEIN 1 395 - -
Sto3g1050 396 MobiDBLite consensus disorder prediction 282 299 - -
Sto3g1050 396 Pfam CCT motif 357 395 IPR010402 GO:0005515
Sto3g1050 396 MobiDBLite consensus disorder prediction 25 53 - -
Sto3g1050 396 ProSiteProfiles CCT domain profile. 357 396 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1050 Sto-Chr3 7275087 7277234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1050 293 395 C2C2-CO-like Transcription Factor Family AT1G73870 44.538 3.22e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto3g1050 CCT 1e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1050 - - adu:107496352 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1050 3 7275087 7277234 Sto3g1050 3 7275087 7277234 ECH