Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1046 ATGGTGTCCCAACCTCCATCCCCGCTTCCATCTGAAACTATCATCTTCGGGAAGTACCGATTGACTCGTCTACTCGGCCGCGGAAGCTTCGCGAAGGTTTACTATGCGGAATCGTTGAGGGATGGAAGCACTGTGGCCGTCAAAATCATAGACAAAGTCATCATGGGAGCCGCCATGGAGAGTCTCGTCATTCGAGAAATCGACGCGATGCGACGCCTACAACACCATCCCAATATCCTCAAAATCCATGAGGTGATGGCGTCAAAGACCAAGATCTACCTCGTCGTGGAGTTCGCCCCCGGCGGCGAGCTCGGGACGCGGATCGTTAAAAAAGGCCGGATACCGGAACCGTTAGCGCGGCGTTATTTCCAGCAAGTGGTCTCCGCCCTGCGTTTCTGCCACGGAAACGGCGTCGCTCACCGCGACATCAAGCCTCAGAACTTGCTCTTGGACAAGGACGGGGATGTGAAGGTCTCGGACTTCGGGCTCTCCGCCTTGCCCGAGCAGCTCAATAACGGCTTGCTGAAGACGGCTTGCGGCACGCCGTGCTTCACCGCGCCGGAGATTCTCCACCATCGCAGGTACGACGGCTCGAAAGCCGACGCGTGGTCGTGCGGGGTCTTACTCTACGTGATGCTCACCGGATACCTCCCGTTCAACGATTCCAACATGCCGATGATGTTCAGGAGGATTAACTCACGCAGCTATGTCTTTCCCGCCTATATCTCGGGGCGAGCGCGTTCGGTGATCCACAATTTGCTCCACCCGGACCCGCTTCACAGGATGAGCCTCGAAGATCTGTTTGGGAACCCGTGGTTCATGACGTCGCTGAGACCCGAACCCGAGAAGAGCATATTCGGGTCGGATAACAATACAGGGTCGAAGTACGCTGGGTTGAATGCTTTCGATATAATATCAATGTCTCCGGGTCTGGATTTGAGGGGTTTGTTTGAAACGACGTCGGAGAAtatgaaggagaagaggtttGTGTCGAATGCGAAGACGGAAGTGGTGGTGGAGAAAATCAAAGAAATTGGGGGGagattaggatttaaggttgaaCTGGGGAAGAATGGGTCAATTGGAATGGGGAAAGGGAAGGTGGTTGTGGTGTTTGAGGTGTTTGAGATAGTTGCAGGTATGGCGATGGTGGCTGTGAGAGTGGAGGATGGAGGGTTGGAATTTGAGGAGCGTTATTGGAACGACTGGAAATTAGGGCTTCAAGATGTAGTTTGTTCCTTGGCACAATAA 1251 0.5244 MVSQPPSPLPSETIIFGKYRLTRLLGRGSFAKVYYAESLRDGSTVAVKIIDKVIMGAAMESLVIREIDAMRRLQHHPNILKIHEVMASKTKIYLVVEFAPGGELGTRIVKKGRIPEPLARRYFQQVVSALRFCHGNGVAHRDIKPQNLLLDKDGDVKVSDFGLSALPEQLNNGLLKTACGTPCFTAPEILHHRRYDGSKADAWSCGVLLYVMLTGYLPFNDSNMPMMFRRINSRSYVFPAYISGRARSVIHNLLHPDPLHRMSLEDLFGNPWFMTSLRPEPEKSIFGSDNNTGSKYAGLNAFDIISMSPGLDLRGLFETTSENMKEKRFVSNAKTEVVVEKIKEIGGRLGFKVELGKNGSIGMGKGKVVVVFEVFEIVAGMAMVAVRVEDGGLEFEERYWNDWKLGLQDVVCSLAQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1046 416 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Sto3g1046 416 SUPERFAMILY Protein kinase-like (PK-like) 15 279 IPR011009 -
Sto3g1046 416 Gene3D Transferase(Phosphotransferase) domain 1 11 300 - -
Sto3g1046 416 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Sto3g1046 416 Pfam NAF domain 299 354 IPR004041 GO:0007165
Sto3g1046 416 PANTHER SERINE/THREONINE KINASE 11 413 - -
Sto3g1046 416 Gene3D Kinase associated domain 1, KA1 301 412 - -
Sto3g1046 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Sto3g1046 416 CDD STKc_AMPK-like 18 272 - -
Sto3g1046 416 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1046 416 CDD CIPK_C 300 408 - -
Sto3g1046 416 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1046 416 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 413 - -
Sto3g1046 416 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1046 Sto-Chr3 7232574 7233824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1046 6 413 Miscellaneous Gene Families AT3G23000 51.683 1.92e-143 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto3g1046 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1046 K12761 - gmx:100305372 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1046 3 7232574 7233824 Sto3g1046 3 7232574 7233824 ECH