Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1038 ATGCTTGAGGATTCACCAGTATTCAGCTATATCAATAACCTTTCTCCAATAAAGCCAGTTAAATCTGTTCACAATACTCAGACATTGGACTCACTTCGCTTTATTCCAACTCCATCTGTTTTCACATCACCCCATGTCAGCTGTCTCAAGGAATCCAGAGTCCTCGGGAGGCATAATCTTCTGGAGGCACCAAAACCAAAGTTTTCTGAATATGTGAATAGAACTTGTTCCAGTGAAGATGCTCCTAGAAATTCGAATAATGCATATCGTGACTCAAGTGAACTACAAGAAAATACTGATCAAGTGACTTCCGTAGGAGACACTTTGATTGAACCATCTAGTGAATGCACGAAGTTCACAATGGAGCTGCCTCGAGCCTTAACATATGATTGTGGTAGCCCTGGTTTTGATCCCACATCTTGTGGTAATGAGACCAATTCTCTTTTGGAATTGCCTGGCGAGTTGGCATCAGATGTTGCCTGTGTTCATGATGCCTTTGAAAAGGATTCAGCTAAGTGTGAAGTGCCAGGATGTGATTGGGAGAGTCTAATGCCTGATGCCGCTGATATGTTAATTTTTAACTGCCCCAATGAATTAGAAGCTTTTAAGGATCAAATGCTGAAATCATTGGACCCCACAATACAGCTGAGCGCTTTTATGTCTTCGTTATCACAAAGTACCATCGACTACGGCAGGCAGACGCACATTGTTGATCCTTTTGCTTCTGGTTCAGAACATGACATTGAAGATCATCCTTCTAAACCAGAAGCAGCAACAGACACAGACCGGATGCAGGATAATCTTTCTGATATTGCTGTGATGGGTAGCAATCTGAATGAGAACATGGATAATGAGCACGTCTCTATGACACTTCGCGGTACGCGGAGACGCTGTCTAAACTTCGAGATGGCTGGAATGCAGAGTAAGAACTTGGGTGGTAGTTCAAATACCAGTTCCAATATATGTACATCACTATCTTATGAGAGGAATGTTCCTAGTCATAGGCAGCTGcttcctataaaatacaatgTTGATTCACAGAGATGCATTTTTCCTGGAATTGGTTTACACTTGAACGCTCTAGCAAACGTGAGAGATTACAAAATGAGTGAAAATGAAGATTTTCTTTTTGGAAGACAACCCAGCTTCCCCAATTCTGCTTCTTCCTTGCATCTCTTGGCAAGCCAACATCATCAAATATCAATAGTGCCAGCATCATCTGAAAGAAACTTAGATCCGCAACATTATGAGGCTCAGCCTGCTGAAGATTATTCCCAgccatcatcatcatatattGTTGGTGAAGGCGTAAGTTGGATCCAGTTGAAGAAGGTGAAGCTTGCAAGCGCTGGTTATGGGACACTTTCACCTATCTGCTTAGAAAACTGGATGGCTATACCATTTAGGGTCTGCAGTTACTGTGAGTGCTTTGCTGCTGGTATCTACTGCACAGACCCGTGCTCCTGTACGGATTGCTACAACAAACCAATTCATGAAGAAACTGTGCTTGAAACTCGCAAGCTGATTGAGTCTCGTAATCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTGCTGATTCCTTACCTGAAATTGGGGATGACCCCAACAAAACTCCAGCTTCTGCACGACACAAAAGAGGATGCAACTGCAAGAAATCTGGCTGCATAAAGAAATATTGTGAATGTTACCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAACGCATATGGTAGAAAGGATGGTCCTTGTTTTTCTACTTTAGGAATAGAAGCTGAACCAGAAGAAACAGAATCATGTGAAAAGCGTTTGGCCGGAAAAACTGTACAGAAAACTGAAATTCAGAATAATGAAGACCATGCAGATTCTGCTCCTCCCGCATCACCATTACGGTTTTGCAGATTGTTGGTTCCGTTGCCCTTTTCATCAAAGGGACAACCACAAAGATCTTTTGTCACTACAACATCTGCTTCCAGATTCTATGGCAGCCAAAATTTCGAGAAACCCAGTATTCTTCGGTCTCAACCGAAGCTCTTGCAGAATTTCCAGAACATTCCAGAAGATGAAATCCAAATGCCTGATCCCATTACATGCAGCATCAAGACTCGTTCTCCCAATAGCAAGAGGATCTCCTCTCCCAAGTGTGAACTGGGACCATCTCCCACTGCTAGTCGTAGAACTGGCCGGAAGTTGATATTACAATCCATCCCTTCATTTCCTTCTCTCAACCCCAACCATTAG 2256 0.4242 MLEDSPVFSYINNLSPIKPVKSVHNTQTLDSLRFIPTPSVFTSPHVSCLKESRVLGRHNLLEAPKPKFSEYVNRTCSSEDAPRNSNNAYRDSSELQENTDQVTSVGDTLIEPSSECTKFTMELPRALTYDCGSPGFDPTSCGNETNSLLELPGELASDVACVHDAFEKDSAKCEVPGCDWESLMPDAADMLIFNCPNELEAFKDQMLKSLDPTIQLSAFMSSLSQSTIDYGRQTHIVDPFASGSEHDIEDHPSKPEAATDTDRMQDNLSDIAVMGSNLNENMDNEHVSMTLRGTRRRCLNFEMAGMQSKNLGGSSNTSSNICTSLSYERNVPSHRQLLPIKYNVDSQRCIFPGIGLHLNALANVRDYKMSENEDFLFGRQPSFPNSASSLHLLASQHHQISIVPASSERNLDPQHYEAQPAEDYSQPSSSYIVGEGVSWIQLKKVKLASAGYGTLSPICLENWMAIPFRVCSYCECFAAGIYCTDPCSCTDCYNKPIHEETVLETRKLIESRNPLAFAPKVIRSADSLPEIGDDPNKTPASARHKRGCNCKKSGCIKKYCECYQGGVGCSISCRCEGCKNAYGRKDGPCFSTLGIEAEPEETESCEKRLAGKTVQKTEIQNNEDHADSAPPASPLRFCRLLVPLPFSSKGQPQRSFVTTTSASRFYGSQNFEKPSILRSQPKLLQNFQNIPEDEIQMPDPITCSIKTRSPNSKRISSPKCELGPSPTASRRTGRKLILQSIPSFPSLNPNH 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1038 751 MobiDBLite consensus disorder prediction 707 751 - -
Sto3g1038 751 ProSiteProfiles CRC domain profile. 462 583 IPR005172 -
Sto3g1038 751 MobiDBLite consensus disorder prediction 242 262 - -
Sto3g1038 751 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 751 - -
Sto3g1038 751 MobiDBLite consensus disorder prediction 76 105 - -
Sto3g1038 751 MobiDBLite consensus disorder prediction 732 751 - -
Sto3g1038 751 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 751 IPR044522 GO:0003700
Sto3g1038 751 SMART CXC_2 466 498 IPR033467 -
Sto3g1038 751 SMART CXC_2 543 584 IPR033467 -
Sto3g1038 751 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 546 581 IPR005172 -
Sto3g1038 751 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 472 495 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1038 Sto-Chr3 7164753 7169125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1038 2 751 CPP Transcription Factor Family AT4G14770 38.224 8.83e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sto3g1038 TCR 3.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1038 - - gmx:100804447 804.283