Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1033 ATGTTCCCGAGTTGTTACAGAGGGTACACTGATCCGAAAAAAGTGGTGGCTACGAAGCAGAGTTCGTTTCAGAGGATATCTGTGTCGGATTTGAGCATTAATCCTGGGAGCGGTTCGTTGTCGGAGGATTTGTCGATGTCGCTGGTGGGATCTAATCTGCACGTCTTCACGCTGGCTGAGATGAAGCTCATCACGCAGGGCTTTTCTTCTAGTAATTTCCTGGGCGAGGGTGGGTTTGGGCCCGTCCACAAGGGCTTCATTGATGACAAGCTCAGGCCCGGGCTTAAGCCCCAGACCGTCGCTGTTAAGCTTCTCAACCCCGATGGCTCCCAGGGCCACAAGGAGTGGTTGACGGAAGTTGTTTTTCTTGGGCAACTAAGGCATTCACACCTTGTGAAGCTCATAGGATATTGCTGCGAAGAAGAACACCGGCTTTTGGTGTATGAATACTTGCCCAGAGGCAGCTTGGAGAATCAACTATTTCGAAGATACTCAGTCTCATTGCCATGGTCAACCAGAATGAAAATAGCTGTTGGAGCGGCAAAAGGTCTAGCGTTTCTCCACGAAGCAGAGAAACCTGTGATCTATAGAGATTTCAAAGCTTCCAACATCTTACTAGGCTCAGATCACAATGCGAAGCTCTCAGATTTCGGATTAGCCAAAGATGGACCCGAAGGAGACGACACCCACGTCTCAACCCGAGTTATGGGACACTTAACGGCGAAGAGTGACGTGTACAGTTTCGGGGTGGTACTACTGGAGATACTAACAGGAAGGAGGTCAGTGGACAAAGGGAGGCCACAGAGAGAGCAGAACTTAGTGGAATGGGCCAGGCCCATGTTGAACGACCCAAGGAAGCTTGGGAGGATCATGGACCCAAGGCTCGAGGGTCAGTACTCTGAGATGGGTGCCACTAAAGCAGCCGCATTGGCTTACCAGTGCTTGAGCCACAGGCCAAGGAGTAGACCCACCATGACCACCGTGGTCAACACACTCGAGCCACTTCAGGACTTCGATGATATCCCCATTGCACCCTTCGTCTACACGGTTCCACCGGATCACGACCAGAGGGAGTCCAAGGATGGTCaccaccatcaccaccaccaccaccaccatcaccaccGACGGCACCACCATAGGCAACATCCTCTGAGATCGCCCAAGGCGTCACCTAAGTCCACGACGACGAGTTTGCAGTCGTCACGGAGTGGTGGAAGAAAAAtATTACCGGCTAGTCACGTTCATGGTTGCTATAGAGATCTCCGTCGACGTGGACGCTGTACGACAGAGAGAATGGGGTTTGAATGGTCAAAGGCTATTATTGCcacttattaa 1335 0.4981 MFPSCYRGYTDPKKVVATKQSSFQRISVSDLSINPGSGSLSEDLSMSLVGSNLHVFTLAEMKLITQGFSSSNFLGEGGFGPVHKGFIDDKLRPGLKPQTVAVKLLNPDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLGSDHNAKLSDFGLAKDGPEGDDTHVSTRVMGHLTAKSDVYSFGVVLLEILTGRRSVDKGRPQREQNLVEWARPMLNDPRKLGRIMDPRLEGQYSEMGATKAAALAYQCLSHRPRSRPTMTTVVNTLEPLQDFDDIPIAPFVYTVPPDHDQRESKDGHHHHHHHHHHHHRRHHHRQHPLRSPKASPKSTTTSLQSSRSGGRKILPASHVHGCYRDLRRRGRCTTERMGFEWSKAIIATY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1033 444 MobiDBLite consensus disorder prediction 361 386 - -
Sto3g1033 444 ProSiteProfiles Protein kinase domain profile. 68 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g1033 444 Gene3D Phosphorylase Kinase; domain 1 37 150 - -
Sto3g1033 444 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 375 - -
Sto3g1033 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Sto3g1033 444 Pfam Protein tyrosine and serine/threonine kinase 72 332 IPR001245 GO:0004672|GO:0006468
Sto3g1033 444 MobiDBLite consensus disorder prediction 387 406 - -
Sto3g1033 444 PANTHER OS01G0588500 PROTEIN-RELATED 14 375 - -
Sto3g1033 444 SUPERFAMILY Protein kinase-like (PK-like) 43 333 IPR011009 -
Sto3g1033 444 Gene3D Transferase(Phosphotransferase) domain 1 151 341 - -
Sto3g1033 444 MobiDBLite consensus disorder prediction 349 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1033 Sto-Chr3 7120384 7122358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1033 54 352 Glycoside Hydrolase AT3G07070 48.254 3.01e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto3g1033 PK_Tyr_Ser-Thr 2.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1033 - - gmx:100305397 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g1033 3 7120384 7122358 Sto9g0092 9 813917 820196 ECH
Sto3g1033 3 7120384 7122358 Sto1g0508 1 4673970 4682833 ECH
Sto3g1033 3 7120384 7122358 Sto5g0968 5 6516383 6522543 ECH
Sto3g1033 3 7120384 7122358 Sto3g1033 3 7120384 7122358 ECH