Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g1020 ATGGACAACGGTTTTCTGTTGCCTTCCTCGTCCAGATATCCTGGTCCAACTGCTATAACCTCTTTTCAAGATGATACTGGGAGCAACAAGTCAACAACAGTATACCTTGGGGGCTACGACCGTTGCAGCTTTGACAACCAAACCCCGGGACGACCTTGGGAAGAATCAACAGTCATCTCACAGGCAGATGTAATACATGTAGATGTAGAATTGGCAAGTGTTGCTGTTAATCAGAAAAGTTATAATACTGCTTTTGAATATTGGAGATGGAGTGCTAATGGTGTTTGGGAGGTCTTAGATGGTGTTGATTCTGGTGATGGATCTTCTGGTTTGGGCATTGTTGTGAGGGATGATACTGGCAGATTGATTGATGGAAGATGTGTCAAGACTAGAGCTTGTTCAAGTTCAATGCAGATTGTAAGAATTTGGTGGTCGGTGGAGGCTATTGAGCAGAAGTATGTAAACCGGGATTGGAAATGTTCTAGTGTTATGGTTGATATTCTTCTTTTCAAGCAAAAGCAAGGTCAATCCATCAAGAGGCTTATCCAAGATAAGTTTAGGAGTGCCCAGTTGGTAACCCAGTCTGCACCGGTGAATATCATTGTAGGTTCTCATGTCTGGGTTGAAGATCCAGCACTAGCATGGATTGCTGGAGAAGTTTTTAAAATCAATGGGGAAGAAATCCATGTTCGCACCACATATGGGAAAACAGTTGTCACAAATATCTCAAAGGTTTTTCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTGGATGACATGACAAAACTGTCATATTTGCATGAACCGGGAGTTCTGCACAATCTGTCTACTAGATATGAACTCAACGAAATCTATACCTATACAGGAAATATCCTGATTGCAATAAACCCATTCCAACGGTTACCACATCTATATGATACTCATATGATGGAACAATACAAAGGAGCTGCACTTGGAGAGTTGAATCCCCACGTCTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGGAAAAGCAACTCAATCCTGGTTAGTGGTGAAAGTGGTGCTGGTAAGACGGAGACAACAAAGATGCTCATGCGATATCTTGCATACCTTGGGGGTAGATCTGGAGTAGAAGGGCGAACAGTTGAACAACAAGTTTTGGAATCTAATCCAGTGCTTGAAGCATTTGGGAATGCCAAAACAGTTAGAAACAATAACTCGAGTCGGTTTGGTAAATTTGTTGAGATCCAATTCGACAAGAAGGGGAGAATCTCTGGGGCAGCAATACGAACCTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCCGATCCTGAAAGAAATTACCATTGCTTTTACCTCCTTTGTGCTGCACCAGCTGAGGAAAAGGAGAAGTATAAGCTGGGAAGTCCAAGCTCCTTCCATTACTTAAACCAATCTAACTGCTATGAGTTGGATGGAGTAGATGACACACAAGAATATCTTGCAACTCGGAGGGCAATGGATGTTGTTGGAATCAGTGAGGAAGAGCAGGAAGCGATATTCAGGGTTGTTGCAGCAGTTCTGCACCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCTGTCATCAAGGATGAGAAGTCTAGATTCCATCTTAGCACAACTGCTGAACTTCTAAAGTGTGATGCTAAGTGCTTGGAAGAGGCACTGATCAAGCGTGTGATGATAACACCTGAGGAGGTTATTACAAGAACCCTAGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCCAAAACCATTTATTCACGTTTGTTTGACTGGCTTGTGGAGAAGATTAATAATTCTATTGGGCAAGATCCTAATTCAAAATCTATTATTGGTGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGttttgagCAGTTCTGTATCAATTTTACCAATGAAAAGTTGCAACAACACTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAGGAGATTGACTGGAGTTACATAGAGTTTGTTGATAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTTCTTGATGAAGCCTGCATGTTTCCCAAGTCCACACACGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACCATATCTCATTATGCAGGGGAGGTGACATATCTGGCTGATATGTTTCTTGACAAAAACAAGGACTATGTGGTTGCAGAACATCAGGATCTGCTCACAGCTTCAAAATGCTCATTTGTAGCAGGCCTATTTCCTCCTTCTCCTGAGGAATCATCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCCTTTGTTCAACAGAACCTCACTATATCAGATGTGTGAAGCCGAACAATGTCCTCAAGCCTGCTATTTTTGAAAATGTCAATATAATCCAACAATTACGTTGTGGTGGTGTTCTTGAGGCAATCAGAATCAGCTGTGCTGGATATCCTACTAGACGGACTTTTTATGAGTTTCTTAATCGATTTGGTGTTCTTGCCCCTGAAGTTCTGGATGGAAACTATGATGACAAGGTTGCATGCCAAATGATCCTGAATAAAATGGGTTTGAAAGGCTATCAGATAGGCAAGTCAAAGGTATTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCAGCTAGAATTATCCAGAGGCAGACACGTACTCATATGGCACGCAAGGAATTCATTAAATTGCGCCAAGCTGCAATTTATTTGCAATCCAATTTGCGAGTGACAAATGGTAGCACTGTGGTTTGTACTGTTTTGGAGCCTTGTGGATGCATTAGATTAGAGATTAATGGATTTGTAGGCATATTGGCCCGGAAGCTCTATGAGCAGTTGCGGCGTGAAACTGCTGCTCTGAAGATACAAAAGAACTTCAGAAGATATATTGCTAGGAAATCTTACTTAACAGTACGGTCATCTGCAATCACAATACAGACAGGTCTAAGGGCTATGAAGGCTCGCAATGAATGTAGGTTTAGAAGGCAAACAAAGGCTGCAATTCTTATTCAGGCTCATTTGCGTCAGAAAATTGCATATTCTTATTATAAAAGATTGCAGAAGGCTGCACTTGTTACCCAGTGTGGTTGGAGGCGAAGGGTTGCTAGAAGGGAACTTAGAAAGCTTAAAATGGCTGCAAGAGAGACAGGGGCCCTTAAAGAAGCAAAGGACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAAAAGAGTTTGAGAgCTGATTTGGAAGAGGTTAAAGCACAAGAAATCAGTAAGTTACAAGATGCTTTGCATGAAATGCAATTGAAAGTAGAAGCAGCAAATGACAGGATCATCAAAGAACGTGAGGCGGCTAGGAAAGCCATTGAAGATGCACCTCCGGTTATTAAAGAGACTCCAGTTCTAATTCAAGATactgaaaaaattaattccttAATGGCTGAGGTCAATAGTTTGCAGGAATCACTGCTATTGGAAAGAGAGGCTAGAGAAGAAGCTAAGAAAGCTCATGCAGACGCTGAGGCTAGAAATGCAGAGCTGATTAAAAAAGTTGAAGATTCTGAGCGCAAAGTAAATCAACTCCAGGAATTGGTTCAGAGGTTAGAAGACAAAATTTCCAATGCAGAGTCGGAAAATCAAGTGCTTCGTCAACAAGCATTGGCTGTACCACCAACTGGTAAAGCTATGTCTGCAAGGACAAAATCAGTGATTATTCAGAGGACACCAGAAAATGGGTATGGTCCGAATGGTGAAGCAAAAATTGCACCAGATATGACTCTTGCCATGTCAAATGTACGTGAGCCTGAATCTGAGGGAAAACCACAAAAATCTCTCAACGAGAAGCAGCAAGAAAACCAGGACTTGTTGATCAAGTGCATATCTCAAGATTTGGGATTTTCCCAGGGCAAACCCGTTGCTGCGTGTCTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTCGAAAGAACAAGTGTTTTTGACCACATCATTCAAACAATAGCTTCAGCTGTTGAGGTCCATGATAATACTGATGTATTAGCATACTGGTTGTCTAATACATCCACTTTGTTGTTGCTTCTCCAACGCACTCTCAAAGCAAGTGGAGCAGCTAACTTAACACCACAACGGAGAAGGACAGCGTCTGCTTCTTTGTTTGGAAGAATGTCTCAGGGACTAAGGGCATCTCCACAAGGTGCTggattttcttttctaaatggTCGAGGACGTGGTAGACTGGATGATTTTCGGCAAGTTGAGGCAAAATATCCAGCACTTCTGTTTAAGCAGCAGCTTACAGCCTTCCttgaaaaaatatatggaaTGATAAGAGACAGCCTAAAAAAGGAGATATCTCCACTACTCGGTGATTGGTACTGCAGTCTTCTGTTGCGTCGTGAGTGTTGTTCATTCAGTAATGGGGAGTATTTGAAGACCGGTTTGGCTGAATTAGAACAGTGGTGCAGTGTAGCAACTGAAGAGTATGCTGGCTCAGCTTGGGAGGAACTGAGGCATATTAGGCAGGCTGTTGGATTTCTGGTGATAcatcaaaaacccaaaaagtCCTTAAATGAAATAACGAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGAATAAGTACAATGTACTGGGATGACAAATATGGCACACATAGCGTGTCTACAGAGGTTATATCAAGCATGAGAACTATAATGTCTGAGGATTCTAATAGTACTGTCAGCAGTTCTTTCCTATTAGATGATGACTCAAGCATTCCATTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGATGTAGCTGATGTGGATCCTCCTCCATTAATACGTGAGAACTCAGGATTTGGGTTCTTACTAGCACGCTCAGAGTAA 5043 0.4103 MDNGFLLPSSSRYPGPTAITSFQDDTGSNKSTTVYLGGYDRCSFDNQTPGRPWEESTVISQADVIHVDVELASVAVNQKSYNTAFEYWRWSANGVWEVLDGVDSGDGSSGLGIVVRDDTGRLIDGRCVKTRACSSSMQIVRIWWSVEAIEQKYVNRDWKCSSVMVDILLFKQKQGQSIKRLIQDKFRSAQLVTQSAPVNIIVGSHVWVEDPALAWIAGEVFKINGEEIHVRTTYGKTVVTNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLSTRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAALGELNPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSNCYELDGVDDTQEYLATRRAMDVVGISEEEQEAIFRVVAAVLHLGNIEFAKGEEIDSSVIKDEKSRFHLSTTAELLKCDAKCLEEALIKRVMITPEEVITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLCSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILNKMGLKGYQIGKSKVFLRAGQMAELDARRAEVLGNAARIIQRQTRTHMARKEFIKLRQAAIYLQSNLRVTNGSTVVCTVLEPCGCIRLEINGFVGILARKLYEQLRRETAALKIQKNFRRYIARKSYLTVRSSAITIQTGLRAMKARNECRFRRQTKAAILIQAHLRQKIAYSYYKRLQKAALVTQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQIEKSLRADLEEVKAQEISKLQDALHEMQLKVEAANDRIIKEREAARKAIEDAPPVIKETPVLIQDTEKINSLMAEVNSLQESLLLEREAREEAKKAHADAEARNAELIKKVEDSERKVNQLQELVQRLEDKISNAESENQVLRQQALAVPPTGKAMSARTKSVIIQRTPENGYGPNGEAKIAPDMTLAMSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSQGKPVAACLIYKCLLHWRSFEVERTSVFDHIIQTIASAVEVHDNTDVLAYWLSNTSTLLLLLQRTLKASGAANLTPQRRRTASASLFGRMSQGLRASPQGAGFSFLNGRGRGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDSLKKEISPLLGDWYCSLLLRRECCSFSNGEYLKTGLAELEQWCSVATEEYAGSAWEELRHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTEVISSMRTIMSEDSNSTVSSSFLLDDDSSIPFSVDDISKSMQQVDVADVDPPPLIRENSGFGFLLARSE 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g1020 1680 SMART DIL_2 1499 1605 IPR002710 -
Sto3g1020 1680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 997 1102 IPR027417 -
Sto3g1020 1680 ProSiteProfiles Dilute domain profile. 1381 1623 IPR002710 -
Sto3g1020 1680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 964 IPR027417 -
Sto3g1020 1680 ProSiteProfiles IQ motif profile. 1002 1031 IPR000048 GO:0005515
Sto3g1020 1680 Pfam DIL domain 1514 1602 IPR002710 -
Sto3g1020 1680 ProSiteProfiles IQ motif profile. 930 954 IPR000048 GO:0005515
Sto3g1020 1680 PANTHER MYOSIN 199 979 - -
Sto3g1020 1680 PANTHER MYOSIN 989 1509 - -
Sto3g1020 1680 PANTHER MYOSIN 1512 1676 - -
Sto3g1020 1680 Gene3D Myosin VI head, motor domain, U50 subdomain 505 794 - -
Sto3g1020 1680 Gene3D - 632 816 - -
Sto3g1020 1680 Gene3D - 1001 1051 - -
Sto3g1020 1680 Gene3D - 1052 1101 - -
Sto3g1020 1680 Gene3D - 859 967 - -
Sto3g1020 1680 Gene3D Kinesin motor domain 258 855 IPR036961 -
Sto3g1020 1680 ProSiteProfiles IQ motif profile. 1026 1054 IPR000048 GO:0005515
Sto3g1020 1680 Pfam Myosin N-terminal SH3-like domain 202 244 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 PRINTS Myosin heavy chain signature 285 304 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 PRINTS Myosin heavy chain signature 342 367 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 PRINTS Myosin heavy chain signature 389 416 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 PRINTS Myosin heavy chain signature 622 650 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 PRINTS Myosin heavy chain signature 675 703 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 CDD MYSc_Myo11 269 913 IPR036018 -
Sto3g1020 1680 Gene3D - 445 503 - -
Sto3g1020 1680 Coils Coil 1142 1169 - -
Sto3g1020 1680 ProSiteProfiles IQ motif profile. 1050 1076 IPR000048 GO:0005515
Sto3g1020 1680 Coils Coil 1096 1130 - -
Sto3g1020 1680 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 201 250 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 ProSiteProfiles Myosin motor domain profile. 255 925 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 ProSiteProfiles IQ motif profile. 1073 1102 IPR000048 GO:0005515
Sto3g1020 1680 PANTHER MYOSIN-5 989 1509 - -
Sto3g1020 1680 PANTHER MYOSIN-5 1512 1676 - -
Sto3g1020 1680 PANTHER MYOSIN-5 199 979 - -
Sto3g1020 1680 SMART MYSc_2a 249 926 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g1020 1680 SMART iq_5 1024 1046 IPR000048 GO:0005515
Sto3g1020 1680 SMART iq_5 1049 1071 IPR000048 GO:0005515
Sto3g1020 1680 SMART iq_5 1072 1094 IPR000048 GO:0005515
Sto3g1020 1680 SMART iq_5 927 949 IPR000048 GO:0005515
Sto3g1020 1680 SMART iq_5 1001 1023 IPR000048 GO:0005515
Sto3g1020 1680 Coils Coil 1215 1270 - -
Sto3g1020 1680 Pfam IQ calmodulin-binding motif 1026 1046 IPR000048 GO:0005515
Sto3g1020 1680 Pfam IQ calmodulin-binding motif 1005 1022 IPR000048 GO:0005515
Sto3g1020 1680 Pfam IQ calmodulin-binding motif 930 948 IPR000048 GO:0005515
Sto3g1020 1680 Pfam IQ calmodulin-binding motif 1075 1094 IPR000048 GO:0005515
Sto3g1020 1680 Pfam Myosin head (motor domain) 257 913 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g1020 Sto-Chr3 6996998 7024707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g1020 260 1680 Myosins gene family AT5G20490 74.916 0.0 2258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g1020 K10357 - mnt:21409959 2353.56