Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0980 ATGATGAGTTTGGTTAAGTCATTGATTCTTCTGCTTCTGGTGAAGCTCTGCATCGTTAGCTTTGCTTTGGAAGTCCAAGGATCCGGAGAGTTCACTATATCTCCATCTCCAGCATTCTTTCCTGTCGTTCCTCCTAGAGAAGAAACACCAGGACCTGGTCCTATCCAAAATGGAGAGTCATGGGAAATTAGTGCGCCAAGCTCGCCATCAGATCCAGATGGGTTTGTCATCTCCCCATCCCCAGCAACCATGCCTGTGCATCCTTCTCCCAGAACCGTAGCCCCAAGCATTCCGGAAGTACCAAATGGGCCGTTATTGCACCCTCCAGCTACATTACCACCTCCTGCATCAGCTCCAATTACTGAGAATATAACAGGGAGTGGGCCATCTATATCTCCAAGTTCAAATGCTACAATATTATCACCACCATCAGTTAAGGATGTTCCTCCACCCTCAATTTTACAAGGGCAAGTGCCACCATCAGTACAACCAAGTCCACCTCAAAGGAAAGAACCTACTTTGAGGCCTCCTGTCTCCACACCTGATGCTCCAGCCCCCACTGCAATACCCTCTGCCAATATTCCAAAAACTTCACCAGTTGGCCAACCAATTGAACATGATTTGCCACCTAATGTTGACACAAGGAATGCAAATAGAACCCCAGTCACAATACCTTCTGTCAACTTGCCCCAAATTCCACCGAGCAGCCCACCGGCTGAAGATGGAAGTTTGCCACCTGTTGTTCATAAAGGGCATGCATATACAGGTCGCACCCAAGTGCCACCTTTACCAGGCCCAGTTGTACCCTCTACCAAATTGCCTCACACTGGACATGGAAGTTTGCCTCCTAATAACCATAGAAGGAATGCAAGTACTGATCACACCTTGGAGCCAATTTCACCATCGTCGCTTGGAATGCCTCCTCCAATTTTGCCTTTTTCACCAGTCAGCCAACCTAGTACAAATAAAAGTTTGCCACATAATTTTCATAGAAGGACTAACAAGGAGAGTCACGCCCTGGAGCCAGTTTCACCAGTATCTGTTGCATCCTCGCCAAGGAAAGTGGAACACAATCCGCTAGAAGCTCAACCTATTTCCCCAAATTTAACTCCACCCATATTACCTGCACCAGTTACATCACCAACAAGTGCATTTCCAGTAGACCCACCGTCTGAGCACCCAGTTATTCCAGTATTATCTCCTTCAGATTTACCAGAACCTGTTGTCTCTCCTGCATCAACTCCTTCCAGAAACTTCAACAGGAGAAAGGGTGGAGGACTAGTTGCACCTTCGTATAAAACACCAAAGCCACTTCCAGCTGTAATAAGTTCCCCTGCTCAAGCACCTGCCGCACCTGTAAAGCAATTTCATCAGTCTCCTGAGCCATTGGTATCATCTCATAAATCTCCCGTCAATAAAGGATTTCATTCTCCTGCGTCTTCTCCTACAACCTCATTTTATAAGCATCATCATAAAAGAAACGTAGTAACTCATCCTGCTCCTGCATCATCAGTGGTCTCTCCTCCCACTTCAATAAACCAAGGGCAAGCAATGCCTCCCTCATTAATTCCAACAAGTGGGCGAAGATACCTTGCTCCACCACCAGTGAACCCAGCAACCCCATTCTCTTTCCCTGCTTTGCCACCAGCAAGTGAAGTTTCACATGCTCCTTCTCCATCATTCAAATTTGGCCCTCAGCCTAGCAAAATACCATTTCCTCCTAAAGTATCACCTTCTAGGTCCAAGAGCCGTAAGATACCAGTATTGCCTCATGTTCAAACTCTTCCACCTCCACCTCCTAATGAAGATTGTTTATCAACTGTTTGCACAGAGCCCTATACAAATTCTCCACCTGGAGCACCTTGCAGATGTGTCTGGCCCATGCAAGTTGGTCTTCGCCTTGGTGTTTCTTTGTATACTTTCTTCCCTCTGGTTTCAGAACTGGCTTCTGAAATTGCCTCAGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATAATGGGAGCTAAATCAGCAAACCAGCAACCAGAGAAAACTGATGTCCTCTTAGATTTGGTTCCACTTGGGGAAAACTTTGATAACACTACAGCCTTTTTAACTTCTGACAGATTTTGGCATAAAAAGGTGGTTATAAAAGCTTCCTACTTTGGAGATTATGAAGTGTTATACGTGATCTATCCAGGTTTACCGCCATCTCCTCCTTTACCTCCATCAAGCATCACGATGATAGATGGTGGTCCATTTTCCAATAATGGAAATGACGGAAGGACAATAAAGCCCCTTGGGGTTGACATACCGAAGAGGCATCATAAAAGAGGACTTAGCAGTGGCGTGATTGCCATAATTTCTCTTTCAGCTTTTGTAGCTGTTGTTTTATGCTCTGCTGCTGCTTGGGTCTTGTTGTTCAAGCACAGAGATCATGTATCCCAAACAGCATCAACCCCACGGGTTTTGCCACCTTCTCTTTCCAAAACCCCAGGCACTGCTGGTTCATTGACTGGAGTTGGACCAGGTTCTGCTTCTTCATCATTTCGATCTAGTATTGCAGCTTATAAAGGTTCTGCTAAGACTTTCAGTATGAATGAGATTGAGAGAGCCACCGAAAACTTTCACGATTCAAGAATACTCGGAGAAGGTGGTTTTGGGCGTGTTTATAGTGGTACACTTGACGATGGGGTAAAAGTGGCCGTCAAGGTTCTAAAGAGGGAGGATCATCATGGTGATCGAGAATTCTTGGCTGAGGTTGAGATGCTTAGCCGTCTGCATCATAGAAATTTGGTCAAGTTGATAGGTATATGTACAGAGGACAACTTCCGTTGCTTGGTTTATGAACTCATTCCGAATGGCAGTGTGGAGTCCCATTTACATGGAGTTGACAGGGAGACCACCCCGATTGATTGGAGTGCCCGAATGAAGATAGCTCTTGGTGCTGCTCGCGCTCCGGAGTATGCAATGACGGGGCATCTTCTTGTAAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACTGGAAGGAAACCAGTAGACATGTCACAACCTCCTGGTCAAGAAAACCTAGTTGCATGGGCCCGACCTCTCCTCACAAGCAAACAAGGACTTGAAGCAATCATAGATCCTTCTCTGGGATCTGAAGTACCTTTTGATAGTGTGGCTAAAGTTGCAGCCATAGCTTCAATGTGTGTGCAACCAGAGGTATCAAACCGGCCTTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGCAATGAATGTGATGAAGCAAAAGAAACTTGTTCACGCAGCTCTAGCAAGGAGGATTTGTCAGTTGATCTGGATATGGGAGTCAGTACTTCTTCTGGACAACTACCACATAATTTCCAAACCCCACACTTTGCTACCAACTATGACTCTGGAGTAGATATCGAAAGAGGCCTATCGGTATCAGAATTATTCGGTTCGTCGGCAAGGTTTGGAATGGAGGCGTCTTCATCATTCAGAAGACACTCTTATTCCGGTCCTTTGAGAACCGGAAGAAGCAGACGATTGTGGCAGTTCACAAGGGCAATTTTGGAACATGCAAATTTCTCCTGTCTGGGCCTTCTTGAGGAGAACATGGGAATAGAAAGATATGACTCGGATCAATATCTTTATTGA 3645 0.4551 MMSLVKSLILLLLVKLCIVSFALEVQGSGEFTISPSPAFFPVVPPREETPGPGPIQNGESWEISAPSSPSDPDGFVISPSPATMPVHPSPRTVAPSIPEVPNGPLLHPPATLPPPASAPITENITGSGPSISPSSNATILSPPSVKDVPPPSILQGQVPPSVQPSPPQRKEPTLRPPVSTPDAPAPTAIPSANIPKTSPVGQPIEHDLPPNVDTRNANRTPVTIPSVNLPQIPPSSPPAEDGSLPPVVHKGHAYTGRTQVPPLPGPVVPSTKLPHTGHGSLPPNNHRRNASTDHTLEPISPSSLGMPPPILPFSPVSQPSTNKSLPHNFHRRTNKESHALEPVSPVSVASSPRKVEHNPLEAQPISPNLTPPILPAPVTSPTSAFPVDPPSEHPVIPVLSPSDLPEPVVSPASTPSRNFNRRKGGGLVAPSYKTPKPLPAVISSPAQAPAAPVKQFHQSPEPLVSSHKSPVNKGFHSPASSPTTSFYKHHHKRNVVTHPAPASSVVSPPTSINQGQAMPPSLIPTSGRRYLAPPPVNPATPFSFPALPPASEVSHAPSPSFKFGPQPSKIPFPPKVSPSRSKSRKIPVLPHVQTLPPPPPNEDCLSTVCTEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVSELASEIASGVFMKQSQVRIMGAKSANQQPEKTDVLLDLVPLGENFDNTTAFLTSDRFWHKKVVIKASYFGDYEVLYVIYPGLPPSPPLPPSSITMIDGGPFSNNGNDGRTIKPLGVDIPKRHHKRGLSSGVIAIISLSAFVAVVLCSAAAWVLLFKHRDHVSQTASTPRVLPPSLSKTPGTAGSLTGVGPGSASSSFRSSIAAYKGSAKTFSMNEIERATENFHDSRILGEGGFGRVYSGTLDDGVKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEDNFRCLVYELIPNGSVESHLHGVDRETTPIDWSARMKIALGAARAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKQGLEAIIDPSLGSEVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKETCSRSSSKEDLSVDLDMGVSTSSGQLPHNFQTPHFATNYDSGVDIERGLSVSELFGSSARFGMEASSSFRRHSYSGPLRTGRSRRLWQFTRAILEHANFSCLGLLEENMGIERYDSDQYLY 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0980 1214 Gene3D Phosphorylase Kinase; domain 1 841 944 - -
Sto3g0980 1214 ProSiteProfiles Protein kinase domain profile. 869 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0980 1214 PANTHER OS01G0750732 PROTEIN 979 1185 - -
Sto3g0980 1214 PANTHER OS01G0750732 PROTEIN 421 978 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 83 116 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 499 531 - -
Sto3g0980 1214 ProSitePatterns Protein kinases ATP-binding region signature. 875 897 IPR017441 GO:0005524
Sto3g0980 1214 SUPERFAMILY Protein kinase-like (PK-like) 854 1082 IPR011009 -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 500 521 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 555 584 - -
Sto3g0980 1214 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 421 978 - -
Sto3g0980 1214 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 979 1185 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 365 396 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 811 839 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 227 241 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 60 74 - -
Sto3g0980 1214 Pfam Protein tyrosine and serine/threonine kinase 872 982 IPR001245 GO:0004672|GO:0006468
Sto3g0980 1214 Gene3D Transferase(Phosphotransferase) domain 1 976 1105 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 282 299 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 459 485 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 144 184 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 43 486 - -
Sto3g0980 1214 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0980 Sto-Chr3 6674369 6682224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0980 170 1186 Receptor kinase-like Gene Family AT5G56890 44.606 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Sto3g0980 PK_Tyr_Ser-Thr 8.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0980 - - ccaj:109805519 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0980 3 6674369 6682224 Sto3g0980 3 6674369 6682224 ECH