Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0976 ATGGGGATTGGGAAGACTAGCAAATGGCTCAGAAACTTGTTGAGTGGGAAGAAAAGCAACCCAAAATATGCAGCAAATGATGATCAGAAGAATCCTCCTACTGAAAATCCAGtttcttccacacctcccaaagagaaaagaagatgGAGTTTTCGTAGACCATCAGCCTCAGCAGCAGCAGCACCACCACCTTCCATTTCCAAGCAATTCAATTCTGCAGAACCAAATGTCATTCTCACAATTACTGAGAATGTGCAGAACAAGCAGCACTTCACTACTGTTAATCCCAATGAGGTGGCTGCCATTAAAATTCAATCTGTTTTCCGGTCTTACTTGGCAAGACAAGCATTGTGTGCTCTAAGAGGAATAGTGAAGTTGCAAGCACTTGTAAGAGGCCACTTGGTGAGGAAGCAAGCCATGGAAGCTTTGTTGACAGCACAAGGTAGAGCTTGTGCTCACAGGATCCAAGTTTCATCACAACCAAAGTCTAATCAAAGACATAGAAATACCTCACAGGACAACATTTGGAGGCATATGCATACTGACATGGATGTTGAGGACATCAAGGTAATGGATATGAATGTTTCAGAATCAAAAGCTGAGTGTAGAAGAAGCAGAAACAGAAACATTAATGGGTATGAGTATGAGCATCCCAGATTTGTATTCTCAAtctcaaaacaagaaaaacacaatgtatctccatctccatctccatctcctTCCCCATCAGCACAGACCAGCCCTGCGTCTTCTAAACCAGATGATGCAAAGCTTGGGTATGCAGAATGTGCCAATTCTCACTACTCACTAGTCCCAAACTACATGGCCAATACAGAGTCATCAAGGGCCAAATTCAGATCACACAGTGCACCAAAGCAAAGGCCAGAATCGTTTGAGAGGCAATTGAGTCGCCAAAGAGCTTCAATGGAATGCAGAAATGTAAAGAGGGCAGTGAAAATGCAAAGGTCATCTTCACATGTGGGTTCTACCACTGCTCAAAACtaccatcatcatccatggtcAATCAAGCTTGATAGATCCACTGTTTCACTCGTAGATAGTGAGTGTGGTTCTACAAGTACAGTGCTCACTAATGCTAATTATTGTAGATCTCTTGCTGCATATGATCTTCATCATGAAGATGGTTATTGA 1152 0.388 MGIGKTSKWLRNLLSGKKSNPKYAANDDQKNPPTENPVSSTPPKEKRRWSFRRPSASAAAAPPPSISKQFNSAEPNVILTITENVQNKQHFTTVNPNEVAAIKIQSVFRSYLARQALCALRGIVKLQALVRGHLVRKQAMEALLTAQGRACAHRIQVSSQPKSNQRHRNTSQDNIWRHMHTDMDVEDIKVMDMNVSESKAECRRSRNRNINGYEYEHPRFVFSISKQEKHNVSPSPSPSPSPSAQTSPASSKPDDAKLGYAECANSHYSLVPNYMANTESSRAKFRSHSAPKQRPESFERQLSRQRASMECRNVKRAVKMQRSSSHVGSTTAQNYHHHPWSIKLDRSTVSLVDSECGSTSTVLTNANYCRSLAAYDLHHEDGY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0976 383 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Sto3g0976 383 MobiDBLite consensus disorder prediction 285 306 - -
Sto3g0976 383 MobiDBLite consensus disorder prediction 155 178 - -
Sto3g0976 383 MobiDBLite consensus disorder prediction 1 69 - -
Sto3g0976 383 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Sto3g0976 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 4 359 - -
Sto3g0976 383 MobiDBLite consensus disorder prediction 281 306 - -
Sto3g0976 383 Gene3D - 96 156 - -
Sto3g0976 383 SMART iq_5 96 118 IPR000048 GO:0005515
Sto3g0976 383 SMART iq_5 119 140 IPR000048 GO:0005515
Sto3g0976 383 Pfam Protein of unknown function (DUF4005) 241 319 IPR025064 -
Sto3g0976 383 PANTHER IQ-DOMAIN 5-RELATED 4 359 - -
Sto3g0976 383 MobiDBLite consensus disorder prediction 155 170 - -
Sto3g0976 383 Pfam IQ calmodulin-binding motif 100 117 IPR000048 GO:0005515
Sto3g0976 383 Pfam IQ calmodulin-binding motif 121 138 IPR000048 GO:0005515
Sto3g0976 383 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0976 Sto-Chr3 6651352 6652852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0976 3 370 IQD Protein Family AT4G14750 40.686 1.89e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0976 - - gmx:100817667 318.546