Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0945 ATGGAATCGTCTTATCGTCGGAGAACGGTGCGGCGGAGAAGAGAGGAGGAGAACCTTGCGAGGAAGGTAATTTGGCCTTCAATTCAAGGGCATTCTTGTCCAATATGTTTCATGGACCTGGAGGATCGTTATAGAGAAGCTGCAATTCTCACAGTGTGTATGCACGCCTACTGCATCGGATGCATTCGCAAATGGAGTAACTTGAAGAGGAAGTGCCCCCTTTGTAACTCAACCTTCAATTCTTGGTTTTGTAAGCTCAGTCTTTCATCTAGAGAGTTCCGGAAGGAGGTGTTGCCCTTGGAGGGTTTAACCAGACATTCTCGTCGGGAGGTTAATGCAAGCCATTTGGATGCTCGCAGGTGA 363 0.4793 MESSYRRRTVRRRREEENLARKVIWPSIQGHSCPICFMDLEDRYREAAILTVCMHAYCIGCIRKWSNLKRKCPLCNSTFNSWFCKLSLSSREFRKEVLPLEGLTRHSRREVNASHLDARR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0945 120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 106 IPR013083 -
Sto3g0945 120 SMART ring_2 33 75 IPR001841 -
Sto3g0945 120 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Sto3g0945 120 SUPERFAMILY RING/U-box 32 82 - -
Sto3g0945 120 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Sto3g0945 120 Pfam Ring finger domain 32 76 IPR001841 -
Sto3g0945 120 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 26 115 - -
Sto3g0945 120 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 26 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0945 1 106 C3H Transcription Factor Family AT2G39100 46.903 6.22e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0945 - - pop:18101853 128.257