Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0928 CTGCTTTCCTGCGCTCCCCACACTAGGGTTTTGCCCAAGTTTGAATTCTTGCTCTCTAAAGGTGCTTCTAGATCTGACATTGTCATCATGACGAATAGGAGCCCAAGGTTCTTAGATAGAAGCTTGGAGGATCACATAATCCCCACATATCAATTGCTGAAAGGGATTTTTATATCTGATAAGGCCACCGTTAATTCTATAAAACGCTATCCTGCTCTACTTTATGAAAGTCGTATAGTAATAAATGTCAATTTCTTGCTTGAGAATGGAGTGGCAAGGTCAAACATTGCCTACTTACTTGGTCGTAGTAGTGTTCCACTAAGCTCTCCTGATATCGTCATGGGGGCTGTAGAGGAacttaagggtttgggatttaatccTTTGACTTCACCATTCAGTAGGGCATTCGCAGCCAAACTGGGGGTAAGCAAGTCCCAATGGGATGCTAAAGTTGATGCCTACAAAAAGTGGGGGTGGTCCGAAGAAGCATTATTGGAAGCGTTTAGGAAGTATCCGAATTGTATGTTAGTATCCAAGGATAAAATTGATGCAGTGATGGGCTTTTGGGTTAACCATTTAGGTTGGGATCCTTTGACCCTTCTCAAAGGACCAAAGATTTTTGAATATAGCTTGAAGAACAGGATTATTCCAAGGGCTTTAGTTTTGCAATTTCTTTACTCGAAAGgtttgagaaacaagaaagctAGCTTAGTTAtgccattttttattttggaaaagcAGTTCCTGGAAAATTTTGTGACATGTTTTAAGGAGCATGATTGTCAGCTATTAAAGATATATGAAGAGAAAAAGAACATATAG 822 0.3698 LLSCAPHTRVLPKFEFLLSKGASRSDIVIMTNRSPRFLDRSLEDHIIPTYQLLKGIFISDKATVNSIKRYPALLYESRIVINVNFLLENGVARSNIAYLLGRSSVPLSSPDIVMGAVEELKGLGFNPLTSPFSRAFAAKLGVSKSQWDAKVDAYKKWGWSEEALLEAFRKYPNCMLVSKDKIDAVMGFWVNHLGWDPLTLLKGPKIFEYSLKNRIIPRALVLQFLYSKGLRNKKASLVMPFFILEKQFLENFVTCFKEHDCQLLKIYEEKKNI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0928 273 Gene3D Transcription termination factor 3, mitochondrial 41 260 IPR038538 -
Sto3g0928 273 PANTHER CGI-12 PROTEIN-RELATED 1 271 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 271 - -
Sto3g0928 273 Pfam mTERF 6 181 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 Pfam mTERF 137 238 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 SMART mt_12 28 59 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 SMART mt_12 197 231 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 SMART mt_12 64 92 IPR003690 GO:0003690|GO:0006355
Sto3g0928 273 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0928 Sto-Chr3 6348999 6349820 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto3g0928 mTERF 9.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0928 K15032 - gmx:102667698 268.855