Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0905 ATGGACGGTAATAAGGACGAGGCTTTGAGGTGTATTCGCATCGCCGAGGAGGCGATTGCAACAGGGAACAAAGCGCGTGcgcttaaatttatcaaaattgcACAACGGTTGAATCACAATCTGCCAGTGGATGTGTTACTCAACATGTGTGAGGGGCTTGATTCTCAGTCACCTGCGCCTTCTAAGGATGGAAACTCTGTCCATCAGGTTAAGAGGGAGCATAGTTCAGTGAAAAATGATGAGGAACTGAATGAAGAGCGGAATTATACAGAAGAACATGTTCAATTAATTCGGGAGATTAAGGGAAAGAACGATTATTATGCCATTCTTGGTGTGGAGAAGGCTTGTTCTGTTGAAGAGATTAGGCGAGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGATAAGAATAAAGCACCGGGTTCTGAAGAAGCATTTAAGAAGGTATCCAAGGCGTTCAAGTGTTTAAGTGATGATGGATCAAGGAGGCAGTACGATCAAACAGGGCTGGTAGAGGAGTTTGAATACAACCAGCAGCATAATGTTAGGCGCAGGAGGAGAAGGACAACTGCACATGACTTCTTCGATGATGACTTTGATCCCGATGAGATATTTAGAGCATTCTTTGGACAGGCGGATGTATTTGGGAGAACTAATGTTTACAGGACACGGGGAGTGGGCAGTCACCAGAGGCAGGAATTTCAAGGAGGAGGGGGACTTAATATTATGCTCCTTCTGCAACTTGTACCATTGTTGATAATTTTTCTGCTTGCGTACTTGCCATTTTCTGAACCTGAATATTCTTTGCATAAGAATTACTCATATCAGATACCCAAGACAACAGAGAAGTATGGAGTAGAGTTTTTTGTGAAATCTGAATCGTTTGATGCTAACTATCCACACGGAAGTCCTGCtcgtgcaaatattgaggacaaTGTGATAAAGGATCATAAAAATTTGCTTCGTCGCTACTGTCAAATAGAACTCCAGAGGCGTAGTTGGAACAGGAATTTACCAACTCCTAACTGCGAAAAGCTAGTTGGACTAGCTTGA 1053 0.4122 MDGNKDEALRCIRIAEEAIATGNKARALKFIKIAQRLNHNLPVDVLLNMCEGLDSQSPAPSKDGNSVHQVKREHSSVKNDEELNEERNYTEEHVQLIREIKGKNDYYAILGVEKACSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEEFEYNQQHNVRRRRRRTTAHDFFDDDFDPDEIFRAFFGQADVFGRTNVYRTRGVGSHQRQEFQGGGGLNIMLLLQLVPLLIIFLLAYLPFSEPEYSLHKNYSYQIPKTTEKYGVEFFVKSESFDANYPHGSPARANIEDNVIKDHKNLLRRYCQIELQRRSWNRNLPTPNCEKLVGLA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0905 350 PANTHER CHAPERONE PROTEIN DNAJ 49 1 347 - -
Sto3g0905 350 PANTHER AT29763P-RELATED 1 347 - -
Sto3g0905 350 Gene3D DnaJ domain 102 220 IPR036869 -
Sto3g0905 350 SMART dnaj_3 104 161 IPR001623 -
Sto3g0905 350 MobiDBLite consensus disorder prediction 66 86 - -
Sto3g0905 350 Coils Coil 79 99 - -
Sto3g0905 350 Pfam DnaJ domain 105 166 IPR001623 -
Sto3g0905 350 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Sto3g0905 350 PRINTS DnaJ domain signature 107 125 IPR001623 -
Sto3g0905 350 PRINTS DnaJ domain signature 125 140 IPR001623 -
Sto3g0905 350 PRINTS DnaJ domain signature 141 161 IPR001623 -
Sto3g0905 350 Pfam Domain of unknown function (DUF1977) 263 333 IPR015399 -
Sto3g0905 350 CDD DnaJ 105 158 IPR001623 -
Sto3g0905 350 SUPERFAMILY Chaperone J-domain 102 214 IPR036869 -
Sto3g0905 350 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0905 Sto-Chr3 6213399 6214451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0905 100 166 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 1.88e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0905 K09518 - tcc:18603516 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0905 3 6213399 6214451 Sto3g0905 3 6213399 6214451 ECH