Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0874 ATGGTTCTTTTTCCTTCGCTTGTGAATGGATTGGCAAGAAGTGTGCCATTCAAGAGAGGAAAGAATAGCGAAAAGGAGGATGAAGGAAGAAAAGCTGTGGAAGCATTGGCTAAGGAAGCAAAGAAGAATGAACTATTATTAAGTTCATCTGGAATTGTTAAGTCCCATAAGGCCAACACTTTAGCCTCTGTGTTCTCTAGGAGAGGCCGAAAAGGGACCAATCAGGATTGCCTCACTGTTTGGAAGGAATTTGGTTGTCAAGATGACTTGATATTCTGTGGAATATTTGATGGGCATGGGCCATGGGGACACTTTGTAGCCAAAAGGGTGAGGGAATTAGTACCTGCTTCTTTGCTCTGCAATTGGCAAGAAACTTTGGCTGCAACATCATTGGACCTTGATTTTCAATTGGATGCTGACAGAAACCACCATTGGTTTCACCTATGGAAGCAGTCCTATTTAAAGACTTGTGCTGCTGTGGATCAGGATCTCAAGAACCACTCTAGCTTTGATTCCTTTCGAAGTGGTACTACAGCTTTGACATTCATcaaacagGGTGAACTTCTCATCATAGCAAACGTGGGTGATTCTAGGGCTGTCCTGGCCACTACTTCAGAGGACGATGGCACATTGATTCCTCTTCAACTTACCACTGACTTGAAGCCAAATGTACCAGAGGAGGAAGAGCGCATAAAGCAGTGTAGAGGGAAGGTATTCTGTTTGGAAGATGAACCAGGAGTGTACAGGGTGTGGACTCCCAATGGGAAAACAGCAGGGCTTGCTATATCAAGGGCTTTTGGTGATTACTGTGTCAAGGACTTTGGACTCATCTCTGTGCCTGATCTCACTCAAACAATCCTCACTTCCAAGGATCAATTCATCATCTTGGCAACAGATGGGGTGTGGGATGTGATATCGAACCAAGAAGCAGTGAATATTGTATCCACAGCACCAAAGAAGGAAAAAGCAGCTCAGAGACTTGTTGAATGCGCCGTACATGAATGGAAACGCAAGAGAAGAAGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTCGACTcttgttcttcttcatctcatcATCATCCACCCCAAATCCAAACTTCGGATAAACTTGGCAAATAA 1131 0.4297 MVLFPSLVNGLARSVPFKRGKNSEKEDEGRKAVEALAKEAKKNELLLSSSGIVKSHKANTLASVFSRRGRKGTNQDCLTVWKEFGCQDDLIFCGIFDGHGPWGHFVAKRVRELVPASLLCNWQETLAATSLDLDFQLDADRNHHWFHLWKQSYLKTCAAVDQDLKNHSSFDSFRSGTTALTFIKQGELLIIANVGDSRAVLATTSEDDGTLIPLQLTTDLKPNVPEEEERIKQCRGKVFCLEDEPGVYRVWTPNGKTAGLAISRAFGDYCVKDFGLISVPDLTQTILTSKDQFIILATDGVWDVISNQEAVNIVSTAPKKEKAAQRLVECAVHEWKRKRRSIAMDDMSAICLFFDSCSSSSHHHPPQIQTSDKLGK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0874 376 ProSiteProfiles PPM-type phosphatase domain profile. 61 354 IPR001932 -
Sto3g0874 376 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 361 - -
Sto3g0874 376 CDD PP2Cc 62 354 IPR001932 -
Sto3g0874 376 PANTHER ALPHABET, ISOFORM E-RELATED 1 361 - -
Sto3g0874 376 Gene3D - 47 356 IPR036457 -
Sto3g0874 376 SUPERFAMILY PP2C-like 54 355 IPR036457 -
Sto3g0874 376 Pfam Protein phosphatase 2C 68 332 IPR001932 -
Sto3g0874 376 SMART PP2C_4 52 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0874 Sto-Chr3 6006444 6008366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0874 1 354 PP2C-type Phosphatase Gene Family AT3G05640 60.000 6.33e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0874 - - gmx:100814087 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0874 3 6006444 6008366 Sto3g0874 3 6006444 6008366 ECH