Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0871 ATGGGACAAGAATCAGATGTCAAAGCCCAGTTAGTGTTGGAGATTTGCTCCATTTCCACTCGCTCTGTGGTGTGCGTTCATCGCCTCCTCTCGAACCCATCtaaaccttcttcttctttcatcgATTGGTATCACATTCTTGGAGTGGAAGAAAATGCAGGGGTAAATACCATTCGCAAGCGATACCATAAACTAGCATTGCAACTTCACCCTGATAAGAATAAACATCCCAAGGCTGAAATTGCTTTCAAGCTTGTCTCTGAGGCATATACATGTCTGTCTGATGCTGCCAAGAGGAAAGCCTTTGAGTTAGAGAGATGGAAGAACTTCTGCTTTGAGTGCAAAGGGATTCCATATTCTTCATCTGCCAATGTCCCTCGCAATTCCAATGGTGGTTCAAGTTTCAAGGTGTGGAATATTATCAGCAGGTCTAGATCTTATAAGCTTTGGAGAAATGTAAAGGAGATCAGAGAAAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGAGAGCAAATTCCATGTCAAGAAGCATGTCTCAACACAGAGTTGAGAAGGAAACACCTGTTTTCAATCCCTCAGACTATTTTTACCAAGGCTACCCTCATCAGAGAAGCCAAGTTTACAGGAATTCTGAGGCATGTTGGTACTTGCAGACAGAAAATAATATACTGCACAATGATAGGGGAGGAGCCAAGTACAACTCCCCAGTGTTTGAAGTCAGGTCTGAAAGGAGAATGTTTACAAGCAAATTTGCTTATGTACCTTCATGA 777 0.4131 MGQESDVKAQLVLEICSISTRSVVCVHRLLSNPSKPSSSFIDWYHILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKGIPYSSSANVPRNSNGGSSFKVWNIISRSRSYKLWRNVKEIRERFKEEAKVIENCLRANSMSRSMSQHRVEKETPVFNPSDYFYQGYPHQRSQVYRNSEACWYLQTENNILHNDRGGAKYNSPVFEVRSERRMFTSKFAYVPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0871 258 Pfam DnaJ domain 42 102 IPR001623 -
Sto3g0871 258 SMART dnaj_3 41 98 IPR001623 -
Sto3g0871 258 CDD DnaJ 42 95 IPR001623 -
Sto3g0871 258 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 249 - -
Sto3g0871 258 ProSiteProfiles dnaJ domain profile. 42 106 IPR001623 -
Sto3g0871 258 Gene3D DnaJ domain 41 137 IPR036869 -
Sto3g0871 258 PANTHER BNAC03G44070D PROTEIN 4 249 - -
Sto3g0871 258 PRINTS DnaJ domain signature 44 62 IPR001623 -
Sto3g0871 258 PRINTS DnaJ domain signature 62 77 IPR001623 -
Sto3g0871 258 PRINTS DnaJ domain signature 78 98 IPR001623 -
Sto3g0871 258 SUPERFAMILY Chaperone J-domain 37 105 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0871 Sto-Chr3 5986365 5987444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0871 3 103 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.962 5.80e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0871 - - gmx:100801809 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0871 3 5986365 5987444 Sto3g0871 3 5986365 5987444 ECH