Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0853 ATGGCTTCGCCTTCCCCTTCTTGCTGCTGCTTCAACCTTTTCGTTTTACTCATCTTCTTTGCACTGCCCTCCATTTCTCATGCCCAGACTGCCAACTCCTGCAACGGCATATTCTTATCCTACGCCTACACCGGCGGAACGCGGCTTCCCCCCAATGTCTCCGATCCGGCGAAGCAACCTTACCGATTCGAGTCCACGCTTACTGTGCTCAACAACGGACTCGACCAACTCAAGTCCTGGAAGGTGTTTGTGGGGTTCCAGCACGACGAGTACTTGGTCTCTGCATCGAATGCGGTGCTCGCCGATGGCACTAGCCTCCCTGCCGCCGTCGGGAATGGAACCGTCTTTGCTGGCTATCCGATGACCGATCTCAAGACGGCGGTGGAGACTGCAGGGGACTTGACGCAGATGCAGCTTCAGATCGATTTGGTGGGGACACTCTTCGGTGTGGCGCCTCCCAATGTGCCCATGCCCTCGAACATCACCCTCGCTAATGATGGATTCGTCTGTCGCAAGCCCACTGCTCAAGGTAAGAATGGAACTAGTGTGTGTTGCACAAAAGATCCCAAGTTCAAAACAAACATCACCACAGATGAAAAATTCCTGCCCCGCCAGAATGGTGATCTTACAATTATGTATGATGTGACCAGAACTTATGATTCCAGTTACTGGGTAGATGTTACCATCTCAAACCATAACCCCCTTGGCCGCCTTGACAACTGGAGACTAAACTGGGATTGGATGAGGGATGAGTTTATCTATACAATGAAAGGGGCTTATCCCACTAATATAGATTCCTCCGACTGTATATTTGGCCGGCAAGGTACTTACTACAGGGATCTTGACTTTGCCAATGTACTGAATTGTGAAAAAAGGCCTACAATAATTGATCTCCCTCCCACCAAGTACAATGACACCGATCTAGGCAAAATTCCTTTTTGCTGCCGAAATGGTACAATCTTGCCACCATCCATGGATCCTAGCATGTCTTCTTCGAGATTCCAAATGCAGGTCTTTAAAATGCCTCCGGACCTTAATCGCTCCCAGCTTTCACCACCACAGAACTGGAAGATAAGTGGCACACTCAACCCTGACTACAAATGTGGCCCTCCCGTCCGGGTAAGTCCTTCTGAAACCCCGGATCCATCAGGCATAGCATCAAACAAATCTGCAATGGCTAGCTGGCAGGTTGTGTGCAATATAACACAGGCCAAAGGGGCACCACGTAAATGCTGTGTCTCGTTTTCTGCATATTACAATGAATCTGTTATTCCCTGCAAAACTTGTGCATGTGGATGCCCCAGTAACACTGGCAAAACTTGCAGTACTACTGCACCAGCTATATTACTTCCACCAGAGGCTCTTCTTGTTCCTTTTGAAAATCGGAGTGCCAAGGCTATAGCTTGGGCTGACCTAAAACATCTTCCTACATCAAATCCAATGCCATGTGGTGATAACTGCGGTGTGACCATAAACTGGCATCTTCTTACAGACTACAGCCGAGGATGGAGCGCAAGGGTCACACTCTTCAATTGGGGCGATACTAACTTTGCTGACTGGTTTGCTGCAGTGCAAATGGACAAAGCAACTGCAGGTTTCGAAAAAATGTATTCGTTCAATGCAAGTGCCCTAGCAATAGACAAGGGTGTTAATAATACCATATTGATGCAAGGTCTTCCAGGATTGAACTACCTTGTGGCAGAAACAGATGGGGCAAACCCTTTGAGTGATCCTAGGGTGCCTGGTAAACAACAGTCAGTGATCTCATTTACTAAGAAAACTACTCCTGGAATCAATGTGGCTGGTGGAGATGGATTTCCTACTAAGGTCTTCTTCAACGGGGAGGAATGCTCTCTTCCTTCTGTGTATCCAACCAGTGGATCCAAGAAGGAACCTTTCCATGCTTCTTCAATCATCCTAACACTGCTTCTGTTGGTATTTATGTGGCAATAG 1953 0.4793 MASPSPSCCCFNLFVLLIFFALPSISHAQTANSCNGIFLSYAYTGGTRLPPNVSDPAKQPYRFESTLTVLNNGLDQLKSWKVFVGFQHDEYLVSASNAVLADGTSLPAAVGNGTVFAGYPMTDLKTAVETAGDLTQMQLQIDLVGTLFGVAPPNVPMPSNITLANDGFVCRKPTAQGKNGTSVCCTKDPKFKTNITTDEKFLPRQNGDLTIMYDVTRTYDSSYWVDVTISNHNPLGRLDNWRLNWDWMRDEFIYTMKGAYPTNIDSSDCIFGRQGTYYRDLDFANVLNCEKRPTIIDLPPTKYNDTDLGKIPFCCRNGTILPPSMDPSMSSSRFQMQVFKMPPDLNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPSETPDPSGIASNKSAMASWQVVCNITQAKGAPRKCCVSFSAYYNESVIPCKTCACGCPSNTGKTCSTTAPAILLPPEALLVPFENRSAKAIAWADLKHLPTSNPMPCGDNCGVTINWHLLTDYSRGWSARVTLFNWGDTNFADWFAAVQMDKATAGFEKMYSFNASALAIDKGVNNTILMQGLPGLNYLVAETDGANPLSDPRVPGKQQSVISFTKKTTPGINVAGGDGFPTKVFFNGEECSLPSVYPTSGSKKEPFHASSIILTLLLLVFMWQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0853 650 PANTHER COBRA-LIKE PROTEIN 7 8 647 - -
Sto3g0853 650 Pfam COBRA-like protein 223 402 IPR006918 GO:0010215|GO:0031225
Sto3g0853 650 PANTHER COBRA-LIKE PROTEIN 7 8 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0853 Sto-Chr3 5910390 5912769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0853 34 631 COBRA Gene Family AT4G16120 69.449 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0853 - - gmx:100803929 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0853 3 5910390 5912769 Sto3g0853 3 5910390 5912769 ECH