Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0847 ATGTGCTGGAAATGGAAGCACAGTGAGAAATTTATTGACAGAGGTTTGACAAGGTTGAAATATCTGCCAATAAACCCTTCTGTAATTGCTAAGGACAGAATGTCAAAAGGAACAAGTCTGGCACTGGAATCATCTGAAAATGGCACAGATTTATCTCAGGATGATATTGGCACCATTGAGGAAACACCAGAAGAGTCAATTCTGTCACGACAAACTTCTGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCAAAACAATGCGGCTTTTCTATTAGACGACACCGTACTCGAGGAAAGGATGGGGTTGGTCGTGGAGTTACTAGAAGGGATTTTACTTGCCATCGGGGTGGGTATCCCCAAATTAAGCCATCTGACGATGGAAAGATGCAAAGGAATCGCAAATCTTCTCGTTGTGGTTGTCAAGCATATATGCGAATTGTCAAAAGAGCAGATTTTGATGTCCCTGAATGGCGTGTTACCGGCTTTAGCAACATCCACAATCACGAGTTATTAAAATCTAGTGAGGTGCGTCTTCTTCCAGCATATTGTACAATATCTCCTGATGACAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGTTAAGATTGATGGAACTTGAGAAAGGCATCAAACTTGGTTGTTTACCTTTTACAGAGATCGATGTGCGAAACTTGCTGCAGTCTTTTAGAAATGTTGATAGAGATAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTGAAAGATTTAAATCACAACTTCAAGTATGAATTTAAAATAGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCCTTTGCCTCATCTATCCAGTCATATGACGCATTTGGAGATGCTGTGGTTTTTGATACAACCCACCGTCTGGATGCCTATGACATGTTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGTGCACTTCTTCGGGATGAAAATATGCAGTCTTTTTCATGGGCCCTTAAGGCATTCTTAGGCTTCATGGAAGGAAAGGCTCCACAAACAATATTAACCGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCCTGAAACGAAACATGCCTTTTGCATATGGCACATTATTGCTAAGTTTTCTGACTGGTTTTCTGTGCTTCTTGGATCACATTATGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAACTTGGAACTGGTGGAAGATTTTGAAGAAGGCTGGAAGCAAATGGTTGATACATATGGACTCCATGCAAATAAGCATATTGTTAGCTTACATTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGTGCTACTTCTATGCAGGATTGACCAACACATGTCAGTCCGAGTCAATTAATGCTTTCATCCAACGGTTCTTGAGTGCCCAATCTCAGCTAGATCGCTTTCTAGAGCATGTGGCTGATATTGTTGAATTTAATGACCGGGCTGGAGCGAAGCAAAAGATGCAACGAAAATTGCAAAAAGTGTGCCTTAAAACTGGTTCACCTATTGAATCCCATGCTGCCACTGTGCTTACTCCTTACGCATTTAGTAAACTTCAGGATGAGCTAGTTCTGGCACCACAATATGCCTCCTTTCTGGTTGATGAAGGTTGCTTCCAGGTCAGACACCACACTCAGATGGATGGAGGGTGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATTAGCTGCAGCTGTCATCTGTTTGAGTTTTCAGGCATATTATGTAGACATGTTCTCCGTGTCATGTCAACTAATAACTGTTTTCACATCCCTGAACAATATCTACCTGCCCGATGGCGTGGTGTCAGTTCGTCTTCTGCTAATCCCTTCCGAGGCACAACCTCCAGGGATCATCCTGAAAGAATACAGTTTTTGGAATCCATGGTTTCAACACTTGTAATGGAATCCGTCGAAACAGAGGAACGCCTTGATGTTGCGTGTGAGCAAATTTCCATGGTTTTATCACGTGTCAAAAGCCTTCCTAGGTCATCACATGGTGTGAATGACATTGCATATAATTATCAATCAGATTCACTGATTCTACCAGAGGTGGAAGATGCTGATGGTATAATTCATGGTTTTACAATTGCAAATCCCCATGATTCTATCACTATAGGAAAACTGAAGGAGCGAAGGGCAAGAGATGGAGTTGATATAACTAGGAAGCGAAGACATTTTTCGGGGCCATTGTGTGGGCAGTATGGACATGATGCATCTGATTGCTCGACAATGGCTGGTGATAATTTGAATGGAGATGCTCTAGGGTTTGGACGTTATGTTGTAGAATCCAGTAGTACTGTTAAGGAGCTCTTGAGAATAGtttcccttctcctcctcctaTTTCGGCGTAGATGCGACCTCAAAAGAGCTCTTTGCGCCAATTCTTTCCCTATATTGTTCTTGATTGTCCCATTTGTGGTATGCTTTTCTTCCATGGAGATTCCTTGCTTGCTGATGTTGCTGCTGCTTTCATATTCCCTAGAGCTGTCCTTCTCGGAAGCCATATGTTTGAACATGCAGAAGCAGGATGTTGAAGAAGCTAGCTATGGAAGTGGATGA 2661 0.413 MCWKWKHSEKFIDRGLTRLKYLPINPSVIAKDRMSKGTSLALESSENGTDLSQDDIGTIEETPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSSEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDLNHNFKYEFKIDSNNRLEHIAWSFASSIQSYDAFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCALLRDENMQSFSWALKAFLGFMEGKAPQTILTDHNMWLKEAIAVEMPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFEEGWKQMVDTYGLHANKHIVSLHSLRTFWALPFLRCYFYAGLTNTCQSESINAFIQRFLSAQSQLDRFLEHVADIVEFNDRAGAKQKMQRKLQKVCLKTGSPIESHAATVLTPYAFSKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPEQYLPARWRGVSSSSANPFRGTTSRDHPERIQFLESMVSTLVMESVETEERLDVACEQISMVLSRVKSLPRSSHGVNDIAYNYQSDSLILPEVEDADGIIHGFTIANPHDSITIGKLKERRARDGVDITRKRRHFSGPLCGQYGHDASDCSTMAGDNLNGDALGFGRYVVESSSTVKELLRIVSLLLLLFRRRCDLKRALCANSFPILFLIVPFVVCFSSMEIPCLLMLLLLSYSLELSFSEAICLNMQKQDVEEASYGSG 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0847 886 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 772 IPR031052 GO:0006355
Sto3g0847 886 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 40 772 - -
Sto3g0847 886 Pfam FAR1 DNA-binding domain 92 185 IPR004330 -
Sto3g0847 886 ProSiteProfiles Zinc finger SWIM-type profile. 587 620 IPR007527 GO:0008270
Sto3g0847 886 Pfam SWIM zinc finger 592 617 IPR007527 GO:0008270
Sto3g0847 886 Pfam MULE transposase domain 308 400 IPR018289 -
Sto3g0847 886 SMART 26again6 595 622 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0847 Sto-Chr3 5875044 5879992 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto3g0847 MULE 4.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0847 - - gmx:100778434 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0847 3 5875044 5879992 Sto3g0847 3 5875044 5879992 ECH