Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0833 ATGGCAAATAACGGAAGTAACTTGATGGGGCAACTTGTTGGCTCAGAGATACATGGATTTCATACATTGACTGAGCTGGATGTTGGGAATATTATGGAGGAAGCAAGAGGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTTTGCAATTACAAGTACTTCACCATCCATGTCAAGCCAGTGAATAAGCCCCCAAgTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGAAACTTTCGTAAAGATGGGCACaactggaaaaagaaaaaggacggGAAAACTGTGAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGATAACCCAAGCTTTGTTCGCAGATGTTATTGGCTACTTGATAAGAGTCTAGAACACATAGTGCTTGTTCATTATCGTGAAACGCAGGAGGTGCAATGTTCTCCAGTCACACCcgtaaattcaaattcaaattctaGTTCAGCCTCTGATCCCACCGCACCATGGATTTTATCAGAAGAATTGGATTCTGGGACCAACAACGCATATGATGGTGAGCTGAATGACAATTTAAATGTCAAGAGTCATGAACAGCAGCTTCTTGAGCTTAATACGCTTGAATGGGATGATCTAGTGGTGACAAATGATCTTAACATTTCTACTACATCTATTGGAGGCAAAGTTCCATGTTTCGATCTGCAAAATCAATCTTTATTGAATGGCAATTTGAGCAATGTAGCTAGCAATCCATCTGCAGAAATTCCTTCTTTTGATAATATAACACAGCCAATTACTGGGAGCGGTGGTGCATCTTATAGTTTTCCAGGAACAGTAAATCTTCAGACAGTAGGCAATCCAAATGCACAGAAGGGACATCCTCCTGTCTCTGTGGGTGTCACTGATTCCTTGAACACTTTGGTCAATGATGGTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATCAACCACTTGATTTCTGATTCACAAAGTTCTGTAGAAGAGTCGGCTCTTGTACCCTCGCTTACATCTACTCAAGAGCCATATTCTTCCCTGGTATCCGATCTTCATCAACCTTTGCCAGAGCAAGTTTTTAGATTGACAGATGTGTCCCCTGAATGGGCAGCTTCCACTGAGAAAACTAAGATCCTGGTCACTGGAATGTTTCTTGATAACTATCCACATCTTGCAAAGACCAATCTATTTTGTGTCTGTGGTGATGTAAGTGTTCAAGCTGAATTTGTACAGGTTGGGGTATACAGATGCTGGGTATCACCACAGTCCCCTGGATTTGTGAATCTCTATATGAGCTTTGATGGCCAAAAGCCCATTAGCCAAGTTGTCAATTTTGAGTATCGAACTCCATTGTTGCATGACCCTTTAGCCTCTATGGAAGAGAGGTACAACTGGGACGAGTTTCGACTTCAAATAAGACTTGCTTCTTTGCTCTTTGGCACACCAAAAAGCCTTGATATTTTCTCTAGTAGGGTATCACCTAATGCTCTGAAGGAGGCTAAGAACTTTGCCCTCAAGACCTCAAATGTTTCTGGAATTTGGCGATACTTGATCAAGTCAACTGAAGACAACAAAGCTCCATTTCCTCAAGCAAAAGAAGCACTGATTGAAACATCAATGAAAAATAGACTAAAGGAATGGCTATTAGAAAGAATTCTTTTAGGCCGTAAGACTACTGAATATGATTCCCAGGGTCAAGGTGTAATCCATCTCTGCACTATTTTGGGATATACTTGGGCTGTTCCCTTATTTTCATTGTCGGGCTTGTCACTGGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAAAATGGTAGCAAAACTGTTGTCTGCTGGGGCAAAGCCTAACTTGGTTACAGATCCTACTCCACAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATGAAGGGTTGTGATGGTTTAGCAGCTTTTCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAATGATATGAGCTTAGCTGGAAATATCAGTGGCAAACTGGAAACAAGCACGACTGATCCAGTAGAATATGCAAATCTTACTGAGGACCAGGTATACTTGAAGGAAACGTTGGCAGCTTACCGGACAACTGCTGAGGCTGCAGCACGAATACAAGTTGCATTTAGGGAGCACTCACTGAAATTACGAGCAAAGGCAGTTCAGCTTTTAAGTCCGGAAGATGAAGCACGCAGGATTGTTGCAGCAATGAAGATTCAACATGCCTTTCGCAACTATGAGACTAGGAGGATGATGGCAGCTGCTGCTCACATCCAACATACCTTTCGTACATGGAAAATCCGTAAACAATTTCTCAACATGCGCCGTCAGGCTATAAAAATTCAAGCTGCTTTCCGGGGCTACCAAGTACGGAAACAGTATCGTAAAATTCTTTGGTCTGTCGGAGTACTTGAGAAAGCAATCCTGCGTTGGCGATTAAAGAGAAAAGGCTTCCGTGGGCTCCAGGTTAATCCTGTCCAAGAAATGGGAAATCAGAAGCAGGAAAGTGATACAGAGGAGGACTTCTATCGGGCTGGTCAGAAACAAGCCACAGAACGTGTTGAGAGATCTGTAGTACGTGTTCAGGCCATGTTCCGTTCAAAGAAAGCACAAGAGGAGTATAGGAGGATGAAGCTGGCTCACAATCAGGCAAAGTTGGAACTTGAATATGAAGAGCTTCTCAATTCAGAGATTGATATGCAATAG 2766 0.4194 MANNGSNLMGQLVGSEIHGFHTLTELDVGNIMEEARGRWLRPNEIHAILCNYKYFTIHVKPVNKPPSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHIVLVHYRETQEVQCSPVTPVNSNSNSSSASDPTAPWILSEELDSGTNNAYDGELNDNLNVKSHEQQLLELNTLEWDDLVVTNDLNISTTSIGGKVPCFDLQNQSLLNGNLSNVASNPSAEIPSFDNITQPITGSGGASYSFPGTVNLQTVGNPNAQKGHPPVSVGVTDSLNTLVNDGLQSQDSFGRWINHLISDSQSSVEESALVPSLTSTQEPYSSLVSDLHQPLPEQVFRLTDVSPEWAASTEKTKILVTGMFLDNYPHLAKTNLFCVCGDVSVQAEFVQVGVYRCWVSPQSPGFVNLYMSFDGQKPISQVVNFEYRTPLLHDPLASMEERYNWDEFRLQIRLASLLFGTPKSLDIFSSRVSPNALKEAKNFALKTSNVSGIWRYLIKSTEDNKAPFPQAKEALIETSMKNRLKEWLLERILLGRKTTEYDSQGQGVIHLCTILGYTWAVPLFSLSGLSLDFRDKFGWTALHWAAYCGREKMVAKLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGCDGLAAFLSEKSLVEQFNDMSLAGNISGKLETSTTDPVEYANLTEDQVYLKETLAAYRTTAEAAARIQVAFREHSLKLRAKAVQLLSPEDEARRIVAAMKIQHAFRNYETRRMMAAAAHIQHTFRTWKIRKQFLNMRRQAIKIQAAFRGYQVRKQYRKILWSVGVLEKAILRWRLKRKGFRGLQVNPVQEMGNQKQESDTEEDFYRAGQKQATERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAKLELEYEELLNSEIDMQ 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0833 921 ProSiteProfiles IQ motif profile. 794 818 IPR000048 GO:0005515
Sto3g0833 921 Pfam CG-1 domain 35 147 IPR005559 GO:0003677
Sto3g0833 921 SUPERFAMILY E set domains 372 458 IPR014756 -
Sto3g0833 921 ProSiteProfiles IQ motif profile. 771 800 IPR000048 GO:0005515
Sto3g0833 921 ProSiteProfiles IQ motif profile. 875 903 IPR000048 GO:0005515
Sto3g0833 921 SMART ANK_2a 607 636 IPR002110 GO:0005515
Sto3g0833 921 SMART CG_1_2 31 149 IPR005559 GO:0003677
Sto3g0833 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 821 IPR027417 -
Sto3g0833 921 Coils Coil 887 907 - -
Sto3g0833 921 ProSiteProfiles Ankyrin repeat profile. 607 639 IPR002110 GO:0005515
Sto3g0833 921 Gene3D Immunoglobulins 366 460 IPR013783 -
Sto3g0833 921 Pfam IQ calmodulin-binding motif 796 815 IPR000048 GO:0005515
Sto3g0833 921 Pfam Ankyrin repeat 608 638 IPR002110 GO:0005515
Sto3g0833 921 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 921 - -
Sto3g0833 921 ProSiteProfiles CG-1 DNA-binding domain profile. 28 154 IPR005559 GO:0003677
Sto3g0833 921 Gene3D - 770 818 - -
Sto3g0833 921 ProSiteProfiles IQ motif profile. 752 781 IPR000048 GO:0005515
Sto3g0833 921 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 17 921 - -
Sto3g0833 921 SUPERFAMILY Ankyrin repeat 562 669 IPR036770 -
Sto3g0833 921 MobiDBLite consensus disorder prediction 154 173 - -
Sto3g0833 921 Gene3D - 539 676 IPR036770 -
Sto3g0833 921 SMART iq_5 873 895 IPR000048 GO:0005515
Sto3g0833 921 SMART iq_5 770 792 IPR000048 GO:0005515
Sto3g0833 921 SMART iq_5 793 815 IPR000048 GO:0005515
Sto3g0833 921 ProSiteProfiles Ankyrin repeat region circular profile. 607 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0833 Sto-Chr3 5775047 5784171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0833 31 907 CAMTA Transcription Factor Family AT3G16940 56.300 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sto3g0833 CG-1 1.3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0833 K21596 - gmx:100793970 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0833 3 5775047 5784171 Sto3g0833 3 5775047 5784171 ECH