Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0827 ATGGCGAAGTCGAAGAATCACACAGCTCACAACCAGTCCTACAAGGCTCATAAGAACGGCATCAAGAAGCCTAAGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAACCAGAGGTATGCTAGGAAGCACAACAAGAAGGACGGTGAGGCAGCCACAGAGGAAGAGTAA 186 0.5054 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARKHNKKDGEAATEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0827 61 MobiDBLite consensus disorder prediction 40 61 - -
Sto3g0827 61 Gene3D - 1 61 - -
Sto3g0827 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Sto3g0827 61 MobiDBLite consensus disorder prediction 1 32 - -
Sto3g0827 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Sto3g0827 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Sto3g0827 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0827 Sto-Chr3 5729234 5729510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0827 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 1.27e-32 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0827 K02905 - csin:114294630 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0827 3 5729234 5729510 Sto3g0827 3 5729234 5729510 ECH