Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0815 ATGGCAGATTTATACCCTTTCAACGAATTCAATTTCGGTGGTGCAGTAGTTGTTGAGGACAAATACAGCTCATCCAACAATGCCTTATGGAACATGTCATCATCAGAGCCATGTATTAATGTTGAAGTTGAAGGCAAGCAGTTTCAGATTTCAGGAGCAGAAGAGTGGGGGGATTCAGGTGGTGGTATGGATATGGATTCCTTTTGCTCTGTTAACAATTTCGGCTTCTTTCCAGATCATGAATACCTTCTATCCAGTACACATCAACAAAAGGAGCAGTTATCGTATCTGGATTATGGACCGTTGGATAATCTTCGTTTTGATATGGTGGTTGATAATGATCTCCCAAACGTCGTCGTCGATAGTGATCTTCATCTTGATGTTGATGTCACCGAACCTACCTCTAAGGAATCCAAACCCTCGTTGACTTTTCCTTTAGCCTCGCTTGACCTTCTCAACAACTACGGAAATGGATTTAAGCGTTtcaataatcataataataacaataatgctGAAATATTACCTGAGATTGATCATCGGCGAAATAATCATGAGTCCAGGACGATGAGGAAGCTTTCAACTGAAGATGTGATGAGAATGGCGGGAGCTAGGTTGATCCAGTCAGCATCACTGTGTAATTCAGAGTTAGACGGTTTGGATTCTTCAATTTCTCACCCTTACGCGTTCTGTTTCTCCGGCCTCACCGACGACGAGAAAGACGACGTGGAACTCGCCGAGTCACTCCTCGCTTGCGCTGAGAAAATCGGGTTCCGACAATTCGAACGAGCAACGAAGCTCCTTCATCACTGCGAATCCATGTGTTCCAAGACCGGGAGCCCCGTGAAACGCGTCGTTTCGTACTTCGCGGAGGCTCTTCGCGAAAGGATAAACAGAGAAACAGGGAGATCTCTATCCGCTTCATCACCACCGTCAAAGCTATCTATAGAAGCTGAAACTGTGGTGCGTCATTATCGAAAATACATTCAAGAGCCATGGAAATTCGATCCTGACGAATCAATGCTAGGCCCAAGCCCAACCTCCATCGCGTGCCACGAAGAGCTACCTTTCGCTCAGTTGGTAGAATTCGCGGGAATCCAAGCGATCGTGGAAAACGTGGCGGATTCAAAGAAGATCCACATCATCGATTTGGGAATCAGAAAAGGAGCGCAATGGACGATCCTGATGCAAGCTCTTGAATCAAGATCACGCGAATTCCCGCTGGAGCTTCTTAAAATAACAGCAATAGGAACCACAATGAAAGATTTACTGGAAGCAACGGGTAAGAGACTAACGAGTTTCGCTCAATCCATGAACATACCGTTTTGCTACAAAATCGTAATGGTATCGAATATGCTTGAGCTGAAGGAAGATTTAGTGGAGAAAGATCCAGAAGAAACAATAGCGGTATACACGAAGTTCGCGTTACGGCCTATGATTTCGAAACCGGAGCAGCTAGAAGCGCTGATGAAATGGGTGAGGAATTTGAACCCGGTTGCGATGGTGGTGACGGAGGTTGAAGCGAACCATAATTCGACGTCGTTTGTGAAGCGGTTCACGGAGGCTCTGTTTTACTTCAGTGCGTTTTTTGACTGTGTGGACACGTGTATGAAGGAGGAGGATCCGAATAGGATGGTGCTGGAGTCGTTGTATTTTAGTGAAGGGATAAGGAATATTGTGGCGAGggagggagaagagaggaggATTAGGAATGTGAAGATTGAAGTGTGGAGGGCGTTTTTTGGGAGGTTTGGGATGGTGGAGGAAGAGCTGAGTATGTCGTCGTTGTATCAGGCGGAACTAGTGGCGAAGAGGTTTGCGTGTGGGGAGTATTGCACGTTTGAGATGAATGGGAATTGTTTGCTTAGTGGGTGGAAGGGAACGCCGCTTCACTCTCTCTCGTTTGGGAACTTGCTGTTAGGTATTGGTGGTAGTCCTGGAGGGAGTGATGATTTTGGAGCAGCTTCAGGAGTAGTGCATCCACAAGcctacaattttaattttccaATTCCGAGCATGAATATACCAATAATAGCAGCAGGAGCAGAGTATCGCTATGACCTGTATCAGAACTCTGGGACGCAATACATTAATGGACTTACCACTCAGACTGGTATAGTGAAGGGTCATGGTAATGGAGCCACCGTCTATGGCTCTTTCTATGTTCGCTAA 2169 0.4472 MADLYPFNEFNFGGAVVVEDKYSSSNNALWNMSSSEPCINVEVEGKQFQISGAEEWGDSGGGMDMDSFCSVNNFGFFPDHEYLLSSTHQQKEQLSYLDYGPLDNLRFDMVVDNDLPNVVVDSDLHLDVDVTEPTSKESKPSLTFPLASLDLLNNYGNGFKRFNNHNNNNNAEILPEIDHRRNNHESRTMRKLSTEDVMRMAGARLIQSASLCNSELDGLDSSISHPYAFCFSGLTDDEKDDVELAESLLACAEKIGFRQFERATKLLHHCESMCSKTGSPVKRVVSYFAEALRERINRETGRSLSASSPPSKLSIEAETVVRHYRKYIQEPWKFDPDESMLGPSPTSIACHEELPFAQLVEFAGIQAIVENVADSKKIHIIDLGIRKGAQWTILMQALESRSREFPLELLKITAIGTTMKDLLEATGKRLTSFAQSMNIPFCYKIVMVSNMLELKEDLVEKDPEETIAVYTKFALRPMISKPEQLEALMKWVRNLNPVAMVVTEVEANHNSTSFVKRFTEALFYFSAFFDCVDTCMKEEDPNRMVLESLYFSEGIRNIVAREGEERRIRNVKIEVWRAFFGRFGMVEEELSMSSLYQAELVAKRFACGEYCTFEMNGNCLLSGWKGTPLHSLSFGNLLLGIGGSPGGSDDFGAASGVVHPQAYNFNFPIPSMNIPIIAAGAEYRYDLYQNSGTQYINGLTTQTGIVKGHGNGATVYGSFYVR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0815 722 ProSiteProfiles GRAS family profile. 235 636 IPR005202 -
Sto3g0815 722 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 79 631 - -
Sto3g0815 722 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 79 631 IPR005202 -
Sto3g0815 722 Pfam GRAS domain family 245 633 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0815 Sto-Chr3 5653141 5656935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0815 236 629 GRAS Transcription Factor Family AT1G66350 30.127 1.59e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto3g0815 GRAS 1.1e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0815 - - gmx:100798926 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0815 3 5653141 5656935 Sto3g0815 3 5653141 5656935 ECH