Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0801 ATGGGAACGCCACCAGCAGAAGAGCTTCTCAAGAAGATCGAGGACCTTGAGGCCGGTCACGCACACCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCCAGCGATGCCAGAGCCGAACAGAACCATCATCGCCAGAGGTCGCACTCCATATCGCCGCAGCGTTCGAGATTCGGTGTGCCAAGGAGGAGAGCCGGAGGTGGAGGATTTGACGGACCAGCTTCGTGGAAGAAAGGGTCGTCTTCGTTCAAACATTCGTCACCGCTCCAGAGGGAGAGCCGTAGTAGTGATCCTCAAAACGAAGGAGAAGATGGCTTTGGCAGGAGGGGCCCTTCAGCTGTGAATTTTACTGATAGGCAGTATCTGAATATTTTGCAGTCAATGGGGCAGTCTGTTCATATATTAGATCTTAACGGTCGTATAATATACTGGAACCGTAGTGCTGAAAATCTATATGGTTATTCAGCAGAGGAAGCCCTTGGTCAGGATGGCATTGAGCTGCTGGTAGACCCCAGGGATTTTGCCCAAGCTACTGATATAATCAACCGGGTCTCTATGGGAGAGAAATGGACTGGGCAGTTCCCTTCCAAAAATAAGATGGGAGAGAAGCTTTTAGTTGTAGCGACCAATACTCCTTTCTATGATGACGATGGAAGTTTAGTTGGGATTATTTGTGTCTCGAGTGATTCACGACCTTTTCTTGAAATGAGAGTTCCATTCTCAGGTGTAAAGCACTTTGAAACAGATTCAGGTTCCAGCAATCTTAAAAGTAGCATTACAGCTAGACTTGGTCTTGACTCTCAACAGCCACTTCAAGTTGGTCTAGcatcaaaaatttcaaacttgGCATCCAAGGTGAGTAACAAAGTTAAGTCAAGAATCCGAACAGGAGAAAATAATATGGATCGTGAAGGTGGAAGTGGAGAAAGTCATCATTCTGAGCATTGTTTCTCAGATTCTGTTCTTTCTGACCAGAGAGAAGATGCTAATTCTAGTGGAGCTAGCACACCCAGAGGAGATGTGCCACCATCTCCTTTTGGTGTATTTTCTCAAGTGGAAGACAAATACCAGGGAAAAAATTTAAGAGACTTTGGTGACGAGAGTGAAGGAAAACCTATTCATAAAATCTTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAGAACATTATCATGGCCATGGAAAGCAAATGAACGAGATGGTCTAGAGGGAAGGAATGTCCGTGGTCCTTGTCCTTGGTTGCAGAATGATCAAGAAAATGAACCAGTTCAGAGGAAGAATTTTTCTTCTGGCATGAGGCCAGAGAACCAGGCAGGAGAGAGTAATCGACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTCCTTCAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGGCAGCAGCTGTGCTGTCAATAATAAAGTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAGGACCTGACAATTGGAGAACAAATAGGGCAAGGTTCATGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTATTCTCCAAGCAAGAATACTCAGATGATGTGATAATGTCCTTCCGACAAGAGGTGTCTGTTATGAAAAGACTTAGACATCCAAATGTTCTTCTTTTCATGGGAGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTACAGAGAAACACAGCCAAACTTGACTGGAGGCGGCGAGTTCATATGGCCTTGGATATTGCACGAGGTGTAAACTATCTTCATCATTGCAACCCACCTATCATTCATCGAGATTTGAAGTCTTCAAACCTTCTGGTTGACAAGAACTGGACTGTTAAGGTTGGTGATTTTGGTCTTTCCCGTCTAAAGCATGAAACATTTCTCACAACCAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCCTCAGATGAGAAGTCTGATGTATACAGCTTTGGGGTAATATTGTGGGAACTAACAACTGAGAAGATCCCTTGGGAAACTCTCAACTCCATGCAGGTGATTGGAGCTGTAGGTTTCATGAACCAGCGGCTAGAAATTCCAAAAGATGTTGATCCAAAGTGGGCTTCTATAATTGAGAGCTGCTGGCATAGTGATCCGGCTTGCCGGCCCACATTCCAGGAGCTGCTAGAAAAGCTTCGAGAGCTGCAAAGACGGTATGCCCTTCAGTTTCAAGCAGCCCGATCTGCTGGCGGGGAAAATGCTCAGAAGGAGTCCTAG 2328 0.454 MGTPPAEELLKKIEDLEAGHAHLKQEMSKLKLSGASDARAEQNHHRQRSHSISPQRSRFGVPRRRAGGGGFDGPASWKKGSSSFKHSSPLQRESRSSDPQNEGEDGFGRRGPSAVNFTDRQYLNILQSMGQSVHILDLNGRIIYWNRSAENLYGYSAEEALGQDGIELLVDPRDFAQATDIINRVSMGEKWTGQFPSKNKMGEKLLVVATNTPFYDDDGSLVGIICVSSDSRPFLEMRVPFSGVKHFETDSGSSNLKSSITARLGLDSQQPLQVGLASKISNLASKVSNKVKSRIRTGENNMDREGGSGESHHSEHCFSDSVLSDQREDANSSGASTPRGDVPPSPFGVFSQVEDKYQGKNLRDFGDESEGKPIHKILTSKAEAWIQKRTLSWPWKANERDGLEGRNVRGPCPWLQNDQENEPVQRKNFSSGMRPENQAGESNRPVNNEASGSWSSSFNVNSTSSASSCGSGSSCAVNNKVDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETFLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWETLNSMQVIGAVGFMNQRLEIPKDVDPKWASIIESCWHSDPACRPTFQELLEKLRELQRRYALQFQAARSAGGENAQKES 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0801 775 MobiDBLite consensus disorder prediction 411 457 - -
Sto3g0801 775 Pfam Protein tyrosine and serine/threonine kinase 497 749 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 ProSiteProfiles Protein kinase domain profile. 497 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0801 775 MobiDBLite consensus disorder prediction 292 323 - -
Sto3g0801 775 Gene3D Phosphorylase Kinase; domain 1 490 574 - -
Sto3g0801 775 MobiDBLite consensus disorder prediction 290 346 - -
Sto3g0801 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Sto3g0801 775 CDD STKc_MAP3K-like 503 749 - -
Sto3g0801 775 CDD PAS 129 230 IPR000014 -
Sto3g0801 775 PRINTS Tyrosine kinase catalytic domain signature 571 584 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 PRINTS Tyrosine kinase catalytic domain signature 610 628 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 PRINTS Tyrosine kinase catalytic domain signature 657 667 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 PRINTS Tyrosine kinase catalytic domain signature 676 698 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 PRINTS Tyrosine kinase catalytic domain signature 720 742 IPR001245 GO:0004672|GO:0006468
Sto3g0801 775 SMART serkin_6 497 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0801 775 Pfam PAS fold 121 228 IPR013767 GO:0006355
Sto3g0801 775 MobiDBLite consensus disorder prediction 418 457 - -
Sto3g0801 775 MobiDBLite consensus disorder prediction 324 339 - -
Sto3g0801 775 Gene3D PAS domain 130 233 - -
Sto3g0801 775 SMART pas_2 120 187 IPR000014 -
Sto3g0801 775 MobiDBLite consensus disorder prediction 80 96 - -
Sto3g0801 775 Gene3D Transferase(Phosphotransferase) domain 1 576 761 - -
Sto3g0801 775 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 773 - -
Sto3g0801 775 MobiDBLite consensus disorder prediction 20 113 - -
Sto3g0801 775 SUPERFAMILY PYP-like sensor domain (PAS domain) 124 227 IPR035965 -
Sto3g0801 775 TIGRFAM sensory_box: PAS domain S-box protein 120 230 IPR000014 -
Sto3g0801 775 Coils Coil 6 33 - -
Sto3g0801 775 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 32 773 - -
Sto3g0801 775 SUPERFAMILY Protein kinase-like (PK-like) 485 748 IPR011009 -
Sto3g0801 775 ProSiteProfiles PAS repeat profile. 118 189 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0801 Sto-Chr3 5559516 5566957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0801 1 771 MAP Kinase Kinase Kinase AT3G06620 62.817 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sto3g0801 PK_Tyr_Ser-Thr 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0801 - - gmx:100800867 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0801 3 5559516 5566957 Sto3g0801 3 5559516 5566957 ECH