Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0793 TTGATGAATCTTCTCTCTTCGTGTTGGAAGCCATTCGGCGGGCGTGGTGCTGACCTTGGCGGTGGGGGCGGTGGAAAAGAAGGTAAAGACGGCTTACTTTGGTTCCGAGATATCGGAAGGCATGGTTCCGGTGAATTCTCGATGGCGGTGGTCCAGGCAAACCAGGTTCTTGAAGACCAGAGCCAGATCGAGTCTGGCCCTTTGGGCACCTTTGTCGGCATCTACGATGGTCATGGAGGCCCCGACGCATCTCGATACGTTTGCGATCACTTGTTTCGGAATTTTCGAGCAATATCAGAGGAATCACAGGGAGCTGTGACAGCTGAGACCATTGAAGGAGCATTTCGTCGAACCGAAGATGGGTTCACTGCCCTTGTGTCAGAATCATGGAGTACACGACCTCATATTGCTACGACTGGGACGTGTTGTCTAGTTGGAGTGATTTTTCAGCAGACCTTATTTATTGCAAACCTTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGAAACACTGGAGGTGTTGCTGCAATTCAGCTTTCTACCGAACACAATGCGAATATTGAGGCTATTAGACAGGAACTTAAAGAATTGCACCCGGAAGATTCCCAAGTTGTTGTCCTGAAACATGGAGTATGGAGAGTAAAAGGTATTATTCAGGTTTCTAGATCTATAGATGGTTTATGGGAGCATTTGAGTAATGAGAAAGCAGTGGATATTGTCCACAGTAATCCTCATGCGGGTAGCGCCAAGAGACTGGTGAAAGCTGCGCTGCATGAAGCAGCAAGAAAGCGAGAGATGAGATATTCAGACCTTCACAAGATTGACAAGAAAGTTCGACGCCATTTTCATGATGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAAAGGGGAAGCTCTTCACCCTTCAGTCTCTATTCGAAGTGCTCTCAATCACTGA 954 0.4644 LMNLLSSCWKPFGGRGADLGGGGGGKEGKDGLLWFRDIGRHGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRNFRAISEESQGAVTAETIEGAFRRTEDGFTALVSESWSTRPHIATTGTCCLVGVIFQQTLFIANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANIEAIRQELKELHPEDSQVVVLKHGVWRVKGIIQVSRSIDGLWEHLSNEKAVDIVHSNPHAGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISKGEALHPSVSIRSALNH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0793 317 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 226 317 - -
Sto3g0793 317 SUPERFAMILY PP2C-like 54 295 IPR036457 -
Sto3g0793 317 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 1 225 - -
Sto3g0793 317 Pfam Protein phosphatase 2C 68 225 IPR001932 -
Sto3g0793 317 PANTHER ALPHABET, ISOFORM E-RELATED 226 317 - -
Sto3g0793 317 PANTHER ALPHABET, ISOFORM E-RELATED 1 225 - -
Sto3g0793 317 Gene3D - 36 225 IPR036457 -
Sto3g0793 317 Gene3D - 226 304 IPR036457 -
Sto3g0793 317 SMART PP2C_4 39 292 IPR001932 -
Sto3g0793 317 ProSiteProfiles PPM-type phosphatase domain profile. 42 294 IPR001932 -
Sto3g0793 317 CDD PP2Cc 46 294 IPR001932 -
Sto3g0793 317 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0793 Sto-Chr3 5517590 5521039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0793 1 314 PP2C-type Phosphatase Gene Family AT4G38520 49.867 1.17e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0793 K01102 - gmx:100790813 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0793 3 5517590 5521039 Sto3g0793 3 5517590 5521039 ECH