Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0789 ATGGCTTCGTCTCTGATCTCTAACACAACGACAAGCACAGACCGGTCACGTGACCCCTccaggaggaagaagaagaagaaagctcAACTGAAGCATCAGCAAGAAGATCAGAACCATATCAAATGGAAATCCCAAGCCCAGCAGCAAATCTACTCCTCCAAGCTCCACCAAGCCTTGGCTAGAGTCAAcctcacctcctcctcctcctcctcctccacttCCACCTCCGCCCCCCGCCGCGGAAAAGCCGTCCGCGAAGCCGCCGATAGAGTCCTCGCGGTCACCGCCAAGGGCCGGTCGCGATGGAGCCGAGCCATCCTTACCAATCGCCTCAAGCTCAAGTTCCGCAAGCACAAGAGGCAGAGGGTCTCCGCTGCCGGCGCTTCCGCCGCCCGGTCGAAGAAGCCGAGAGTGAGCGTCCTCCGGCTGAAAGGGAAGAATCTGCCGGCGGTGCAGAGGAAGGTGAGGTTTCTGGGGCGGCTTGTCCCCGGCTGCCGGAAACAGCCGGTGCCGGTGATCTTGGAGGAAGCCATTGATTACATATCGGCGCTTGAGATGCAAGTCCGAGCCATGACCGCGCTGGCTGACCTTCTCTCTGGCTCCGCCGCTTCCGGCGTCGCCTCCACTTCCTCCGCACCACCCAGCTGA 648 0.5556 MASSLISNTTTSTDRSRDPSRRKKKKKAQLKHQQEDQNHIKWKSQAQQQIYSSKLHQALARVNLTSSSSSSSTSTSAPRRGKAVREAADRVLAVTAKGRSRWSRAILTNRLKLKFRKHKRQRVSAAGASAARSKKPRVSVLRLKGKNLPAVQRKVRFLGRLVPGCRKQPVPVILEEAIDYISALEMQVRAMTALADLLSGSAASGVASTSSAPPS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0789 215 MobiDBLite consensus disorder prediction 1 40 - -
Sto3g0789 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 202 IPR036638 GO:0046983
Sto3g0789 215 MobiDBLite consensus disorder prediction 62 79 - -
Sto3g0789 215 CDD bHLH_AtIBH1_like 140 195 IPR044549 GO:0006355
Sto3g0789 215 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 17 213 - -
Sto3g0789 215 MobiDBLite consensus disorder prediction 62 85 - -
Sto3g0789 215 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 17 213 IPR044660 GO:0006355
Sto3g0789 215 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0789 Sto-Chr3 5494088 5494735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0789 39 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 60.870 6.50e-56 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0789 - - gmx:100803765 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0789 3 5494088 5494735 Sto3g0789 3 5494088 5494735 ECH