Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0786 ATGAGCTTTGGCGCACCACCTCCTCCTGCTGCTGTGTTTTCAAGCATCTTTGACATGATGCCTCCATCTGATGATGACATTATTGACGGTTACAACAACAAGCCCAATACTTGCTTTGCCTTCATGGACTTGCTCGATAATTACACCCCCTCTTTCTTCGACTGGCTCCCCTCCACCACCCTCAACCACCCGATTCCGTCGCCGGCCAGCTCCAATGTGCCGGAGTCGTCGGAGgagaaggagaagcctgaaaagaagaagcaaaagaaggAAAGAGTAGCGAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCATCTAGACGATGGCTATAGGTGGCGCAAGTATGGCCAAAAAGCTGTCAAGAACAGCCCCTACCCCAGGAGCTATTACCGTTGCACCACAGCGGGTTGCGGCGTAAAGAAGAGGGTGGAGCGGTCGTCAGAGGACCCCTCCATCGTGGTTACCACGTATGAAGGGCAGCACACGCACCCGAGTCCGAATTTGCAAGAAGCGAGTGGGGGTGCAGCTGCTTTAAATTTGTTGTATACCTCAGGGTCAGGGTCAGGGTCAATACTACCTTGTTCAAGCACTAGTATTAGTTATGAGACGTCGTCGTTGAAACGGTTGGTTGAAGAGCAGAATGGAGGAGGAGCATTAACATCATCATCGTGCACCACTAGTAGTAGGTCGTCGGCTCAAGAGTTGTTAAGGGATAATGGGCTTCTTCAGGACATTATTCTCCCCACCCACATCAACAACAATACCTAG 771 0.4851 MSFGAPPPPAAVFSSIFDMMPPSDDDIIDGYNNKPNTCFAFMDLLDNYTPSFFDWLPSTTLNHPIPSPASSNVPESSEEKEKPEKKKQKKERVARFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPNLQEASGGAAALNLLYTSGSGSGSILPCSSTSISYETSSLKRLVEEQNGGGALTSSSCTTSSRSSAQELLRDNGLLQDIILPTHINNNT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0786 256 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0786 256 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0786 256 SUPERFAMILY WRKY DNA-binding domain 99 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g0786 256 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 76 188 - -
Sto3g0786 256 Gene3D WRKY domain 92 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g0786 256 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0786 256 MobiDBLite consensus disorder prediction 75 92 - -
Sto3g0786 256 MobiDBLite consensus disorder prediction 65 92 - -
Sto3g0786 256 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 188 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0786 Sto-Chr3 5459130 5460504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0786 92 256 WRKY Transcription Factor Family AT5G49520 48.925 9.30e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto3g0786 WRKY 1.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0786 - - gmx:100788697 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0786 3 5459130 5460504 Sto3g0786 3 5459130 5460504 ECH