Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0767 ATGATAGAAGGAAGCAGCAATCAAAAGGAGGAAGATGTGGAGGTTCGACGAGGGCCTTGGACTGTGGATGAGGATCTCACTCTCATCAATTACATTGCCACTCATGGCGAAGGCCGCTGGAACTCCCTCGCTCGCTCTGCTGGGCTGAAACGAACTGGAAAGAGCTGCAGATTGAGGTGGCTGAACTATCTTCGACCCGATGTTCGACGCGGCAACATCACCCTCCAAGAACAGCTTCTGATTCTGGACCTTCATTCTCGGTGGGGAAACAGGTGGTCCAAAATAGCCCAGTACTTGCCGGGGAGAACCGACAACGAGATAAAGAACTACTGGAGGACCCGTGTACAAAAGCACGCCAAGCAGCTCAAATGTGACGTCAACAGCAAGCAATTCAAGGACACCATGCGCTACCTCTGGATGCCTAGGCTTCGAGAGCGCATTCAAGCCTCCTCCTCCATCAATCACTTTCCCCAAACCCCCGAGATTCACAATATTAATCCCGCCACGCCCTCGCATTCTTCCTTTGGAATTATTGCATCTACATCTCACTCTCACCTTTCGCCTATCTCCAACTTTTCTGATTCTTGTTCCGCTCACACTACTCTTCCCCTCCCACATaataatcctaatcctaatcctCCCCATCACTACTACTCCCAAACACCCCATGTGGACGACCAATCCCACTGGGACCCAAACAACCCCTATTCCCCTCAATCTGCTGCCGAGGACAATTTCTGGAATCTTGAAAACATGTTGTTTTTACACCACCACCTCACTCACAACATGTAA 792 0.4924 MIEGSSNQKEEDVEVRRGPWTVDEDLTLINYIATHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQLLILDLHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLRERIQASSSINHFPQTPEIHNINPATPSHSSFGIIASTSHSHLSPISNFSDSCSAHTTLPLPHNNPNPNPPHHYYSQTPHVDDQSHWDPNNPYSPQSAAEDNFWNLENMLFLHHHLTHNM 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0767 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Sto3g0767 263 MobiDBLite consensus disorder prediction 221 237 - -
Sto3g0767 263 SMART sant 16 66 IPR001005 -
Sto3g0767 263 SMART sant 69 117 IPR001005 -
Sto3g0767 263 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Sto3g0767 263 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Sto3g0767 263 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 8 154 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto3g0767 263 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 164 258 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto3g0767 263 CDD SANT 74 113 IPR001005 -
Sto3g0767 263 Gene3D - 17 69 - -
Sto3g0767 263 PANTHER MYB TRANSCRIPTION FACTOR 8 154 - -
Sto3g0767 263 PANTHER MYB TRANSCRIPTION FACTOR 164 258 - -
Sto3g0767 263 MobiDBLite consensus disorder prediction 200 237 - -
Sto3g0767 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Sto3g0767 263 CDD SANT 19 64 IPR001005 -
Sto3g0767 263 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Sto3g0767 263 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Sto3g0767 263 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Sto3g0767 263 Gene3D - 74 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0767 Sto-Chr3 5313516 5314394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0767 13 153 MYB Transcription Factor Family AT1G48000 80.851 2.07e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto3g0767 Myb_DNA-binding 3.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0767 K09422 - sly:101246560 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0767 3 5313516 5314394 Sto3g0767 3 5313516 5314394 ECH