Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0735 ATGGCGTCTGATCTGAATTCAGGGTTATCCAAGAAAACTTCTGTTTTTGGTTTGAAAGTGTGGGAAATAATGGGACTAACCGTCGGGTTTTTCATCATAATCATTCTTGTGGTGCTATCGATTTGTCTTACGTTGCGAAAGAAATCTAGAAAAATCAAGAACAGCATGCTTCCCCTTAGCCATATGATATCTGTTTCAGAAGAGATCAAAGAGATCAGAGTTGATCAAGTTTCTGCAAATAACTATATGCAGAATGGTGCTTTTATAAGTCTGAATGAAAAATTTAGTGACAAGGAGTCTGCGAAAGTTTCGGTTCAAACAAAGAATGGGGATAATCACAATAGTAGTCAATCAGGCTCATTTAATCATTTAGAGAAAGATTGTGCTGGCTCTCTATCAGGCGATGACAGTGGCGCTAAGACGATTTCTTCTTATAGGTCTTCTTTGCATCCTATAACGCCATCCCCCTTGTCCGATCTGCCTGAATTCTCTCAACTCGGCTGGGGTCATTGGTTCACATTAAGAGACCTAGAACTTGCAACAAACAGGTTTTCAAAGGACAATGTTATTGGCGAAGGAGGATATGGAATTGTTTATCAAGGTCAGCTAGGCAATGGAAATCCTGTGGCTATTAAGAAGATTCTCAATAATTTAGGACAAGCTGAAAAGGAATTTCGAGTAGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTCTTGGATATTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTGGAGCAATGGCTTCATGGAGGTATGCTGAAGCATGGTTATCTTACTTGGGATGCTCGGACGAAAATTCTCCTTGGCACAGCTAAAGCTCTGGCATACTTACATGAGGCAATTGAGCCTAAGGTTGTACATCGCGATATTAAGTCAAGCAATATTCTGATTGATGATGAATTCAATGCCAAAATATCTGACTTTGGGCTGGCTAAGTTGCTTGGAGCCGGGAAAAGTCATATAACAACAAGAGTAATGGGTACTTTCGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTCTATAGCTTCGGTGTTTTGATCCTTGAAGCAATTACTGGAAGAGACCCTGTGGATTATGGCCGACCGGCAGATGAGGTAAATTTGGTTGATTGGCTCAAGATGATGGTAGGGAATAGGCGTTCAGACGAGGTGGTGGATCCAAAACTTGAGACTAGACCATCGACAAGTGCCCTTAAACGAGCCCTTTTAACTGCTCTGAGGTGTGTTGATCCAGATGCTGGGAAAAGACCGAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAAGAATATCCTATACCTCGAGAGGATCGAAGACGGCGAAAGAGTCAGGCAGGAGGCACGGAAGTGGAGGCCCAGAGAGAGTGTTCTGATACAGACAAGAGTGATAATCCAGATCATATGTCAAATGGCAGAATAAGGAGccagaagaaataa 1524 0.4186 MASDLNSGLSKKTSVFGLKVWEIMGLTVGFFIIIILVVLSICLTLRKKSRKIKNSMLPLSHMISVSEEIKEIRVDQVSANNYMQNGAFISLNEKFSDKESAKVSVQTKNGDNHNSSQSGSFNHLEKDCAGSLSGDDSGAKTISSYRSSLHPITPSPLSDLPEFSQLGWGHWFTLRDLELATNRFSKDNVIGEGGYGIVYQGQLGNGNPVAIKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGGMLKHGYLTWDARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLILEAITGRDPVDYGRPADEVNLVDWLKMMVGNRRSDEVVDPKLETRPSTSALKRALLTALRCVDPDAGKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGGTEVEAQRECSDTDKSDNPDHMSNGRIRSQKK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0735 507 Pfam Protein kinase domain 185 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0735 507 Gene3D Transferase(Phosphotransferase) domain 1 260 472 - -
Sto3g0735 507 MobiDBLite consensus disorder prediction 458 507 - -
Sto3g0735 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Sto3g0735 507 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Sto3g0735 507 MobiDBLite consensus disorder prediction 455 507 - -
Sto3g0735 507 SUPERFAMILY Protein kinase-like (PK-like) 168 461 IPR011009 -
Sto3g0735 507 PANTHER RECEPTOR-LIKE KINASE PLANT 2 503 - -
Sto3g0735 507 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0735 507 CDD STKc_IRAK 190 456 - -
Sto3g0735 507 PANTHER OS01G0323000 PROTEIN 2 503 - -
Sto3g0735 507 Gene3D Phosphorylase Kinase; domain 1 163 259 - -
Sto3g0735 507 ProSiteProfiles Protein kinase domain profile. 184 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0735 507 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0735 Sto-Chr3 5050878 5053829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0735 161 458 Trihelix Transcription Factor Family AT1G70460 49.835 1.32e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto3g0735 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0735 - - gmx:100793499 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0735 3 5050878 5053829 Sto3g0735 3 5050878 5053829 ECH