Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0716 ATGGAAGGAGAAGTTTCAGTGAAAGAATTTCTGGAAGTTGAAGAAAGGCCATCACACACATATGATAATAACACAGGTTCACCACAGAGGAATGATGAAGAGACCTCCATTAACAAGAGTACTGTGGGATTCAATTTTCTCAGTTTGAGCCTAAATAACTCAGAAAAAGCTCAAGGAAATCAAGGGCAGCAATTAACCCAAGCAGGCTTGCTGAGAATTAAGTTAGAGGAAGCAAAGAAAGAGAATCAAAATTTAAGAGCCAGGTTAAATCATATTACTCATCAATACACTACTCTTCAGAATCACCCTTTTTTAGCGATGAAGAAGCAACAACAATCATCACCAGCTCCAAATTATCTTGATCTACTTaaaaaagaAGATGCCATCGTTACGGAGAAACCAACCATGCCACTTGAAGGTGATCAAATTAATAACTATAACCACACAACAAGAGAAGGTGCTAAAAGCATAGCAGATCAAGCACATGAGCCCTCTACTAGAAAGGCTAGAGTGTCAATAAGAGCACGTTCAGATTATTTTTTGATGGGTGATGGATGTCAATGGAGAAAGTATGGACAAAAGATAGCAAAGGGTAACCCTTGTCCCAGAGCTTATTATCGTTGCAGCATGGGAACGGCATGTCCAGTTCGTAAGCAGGTACAAAGATGTGCTAAGGATGATACTGTACTCATCACAACCTATGAAGGGAACCATAATCATCCTCTCCCACCACCAGCCAGACCCATGGCATGCACAACATCAGCAGCATTGAGCATGTTCCTCTCAGGCTCAATCACTAGTACTACTCCTCCAATTGGTAGCACCAAACTACTAAATTTAGGTCTTCTTCCTTCATTATCTGGTTCTGTCTCTACTGGTTTGGCCACCTTCTCTCCTTCTCCATCATGTCCTACAATAACACTGGACTTAACCCTCCCTTCCAATGATAACTCTTTGCATTTCCAAAGGGATTTCTCACTAGACCATTCTCAACCCTTCCCTTTTCCACTGCATGGTTGTGCTCAACAGATTGTGGGGATGAACTCGTACTCTAAGCCTCCAACCGCGATAACCCCCGAGAAAAACCTTTGCTTGACGGATTTAGTTGGCGCAGCTATAGCCAAAGACCCTTCTTTCAAGGCAGCATGTGTTGCAGCCATTTCCTCATTCACTGGAGCCACTTAA 1185 0.4228 MEGEVSVKEFLEVEERPSHTYDNNTGSPQRNDEETSINKSTVGFNFLSLSLNNSEKAQGNQGQQLTQAGLLRIKLEEAKKENQNLRARLNHITHQYTTLQNHPFLAMKKQQQSSPAPNYLDLLKKEDAIVTEKPTMPLEGDQINNYNHTTREGAKSIADQAHEPSTRKARVSIRARSDYFLMGDGCQWRKYGQKIAKGNPCPRAYYRCSMGTACPVRKQVQRCAKDDTVLITTYEGNHNHPLPPPARPMACTTSAALSMFLSGSITSTTPPIGSTKLLNLGLLPSLSGSVSTGLATFSPSPSCPTITLDLTLPSNDNSLHFQRDFSLDHSQPFPFPLHGCAQQIVGMNSYSKPPTAITPEKNLCLTDLVGAAIAKDPSFKAACVAAISSFTGAT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0716 394 SMART WRKY_cls 182 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0716 394 MobiDBLite consensus disorder prediction 1 19 - -
Sto3g0716 394 MobiDBLite consensus disorder prediction 20 36 - -
Sto3g0716 394 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g0716 394 MobiDBLite consensus disorder prediction 1 36 - -
Sto3g0716 394 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 28 392 - -
Sto3g0716 394 Coils Coil 68 95 - -
Sto3g0716 394 Gene3D WRKY domain 166 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto3g0716 394 ProSiteProfiles WRKY domain profile. 177 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0716 394 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto3g0716 394 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 392 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0716 Sto-Chr3 4920119 4922152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0716 147 311 WRKY Transcription Factor Family AT4G04450 60.241 1.80e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto3g0716 WRKY 4.9e-23 CL0274