Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0697 ATGTCAACGGAACCTCCTCCTTTCCAAGAATCAGCGCGATGTGATGTCTGCAATTGCGGTTTCAATACCTTCAGGAGACGGCATCACTGCCGATGCTGTGGGAGAACATTGTGCTATGAACATTCATCAAATCAGATGGCCTTACCACAGTTTGGCATTTACTCAAATGTCAGAGTATGTGCTGATTGTTTCAACAATTCAGGATCTGGGAAGTATGAACCAGAGGCTTCTTCAAATGGAGCGAACAACATAACAAACACAATTTCCAAACTAGACATTAATGCAGATATAAATTCAAAGGCCCCACCAGCAGTAGAGAGTAAGCAAGAATTGACTGTTAAAGAGTGTAAGTGTGGAATGCCTCTTTGCATTTGTGAAGCTCCAGTCCCTTCCACTTATGCGCTCCCCCAGCAGAAACCCACTCCAGTCATTGCACCTccatcaaatcctaaaccaaagaAGTCAGACGTTGTTCCTAAAAGTAGAAGCTCCTCATCAAACAGCAAGTTTAGTTTATGCAAAAAGTACAGTTCCTTCAATCTTGGTCATGTAACCAGTGGTGCCTCAAACCGACCCCAGATAGAGTATGAAGCTAACGGAGAGGGTTTAAGAGAAGCAATAAAAAATGGCGACGTTGCTGCTGTCAAGAAACTTCTGAATGAGGGTGTGGATGCAAATTACAGGGACAAGCAAGGACTGTCTTTATTGCATCTGGCCGCAGTCTTCAATCAAACTGATATAGTTTTCATTCTAATGGATTCTGGGGCAAGCCTACAGTATAAGAATGCACAAGGAGAAACGCCCTTAGATTGTGCTCCAGCTACCTTGCAATACAAGATGCGAGAGAAGATGGAAGAAGGGAAGGCAATTGATCAAAGcatttga 885 0.4215 MSTEPPPFQESARCDVCNCGFNTFRRRHHCRCCGRTLCYEHSSNQMALPQFGIYSNVRVCADCFNNSGSGKYEPEASSNGANNITNTISKLDINADINSKAPPAVESKQELTVKECKCGMPLCICEAPVPSTYALPQQKPTPVIAPPSNPKPKKSDVVPKSRSSSSNSKFSLCKKYSSFNLGHVTSGASNRPQIEYEANGEGLREAIKNGDVAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLQYKNAQGETPLDCAPATLQYKMREKMEEGKAIDQSI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0697 294 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 8 68 IPR017455 -
Sto3g0697 294 Pfam Ankyrin repeats (3 copies) 205 272 IPR002110 GO:0005515
Sto3g0697 294 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Sto3g0697 294 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 2 288 - -
Sto3g0697 294 Pfam FYVE zinc finger 9 66 IPR000306 GO:0046872
Sto3g0697 294 ProSiteProfiles Ankyrin repeat region circular profile. 231 262 - -
Sto3g0697 294 ProSiteProfiles Ankyrin repeat profile. 198 230 IPR002110 GO:0005515
Sto3g0697 294 SUPERFAMILY Ankyrin repeat 203 273 IPR036770 -
Sto3g0697 294 SMART fyve_4 3 69 IPR000306 GO:0046872
Sto3g0697 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 70 IPR013083 -
Sto3g0697 294 Gene3D - 182 280 IPR036770 -
Sto3g0697 294 MobiDBLite consensus disorder prediction 138 169 - -
Sto3g0697 294 CDD FYVE_scVPS27p_like 7 64 - -
Sto3g0697 294 SMART ANK_2a 231 260 IPR002110 GO:0005515
Sto3g0697 294 SMART ANK_2a 198 227 IPR002110 GO:0005515
Sto3g0697 294 SUPERFAMILY FYVE/PHD zinc finger 8 66 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0697 Sto-Chr3 4810726 4814738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0697 209 269 MAP Kinase Kinase Kinase AT4G18950 39.344 9.35e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0697 - - gmx:100814367 441.425