Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0690 TTGGAAGAGTATGGTGGGGAGGATGTGATAGTGGTGGCGGGTGATGGAACGGGGAACTTCAGTACGATTAATGAAGCGGTGAATTTTGCGCCTAATAATAGCATGGAGAGGATAGTGATATACGTGAAGGCAGGGGTGTATGAGGAAAATGTGGAGATTCCCAGTTATAAGACCAATCTTATTTTGCTTGGAGATGGAACCGATGTCACTCTCATTACTGCTAACAGAAGTGTCGCTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCGGTATCTGGAGAGGGATTTCTGGCACGAGACATAGCCATAGAGAACAAGGCAGGAGCGGAGAAGCACCAAGCAGTAGCGCTAAGAGTAAACGCCGACTTAACGGCATTCTACAGATGCGCCGTTTATGGCTTCCAAGACACCCTTTACGTCCACTCCTTTCGTCAGTTCTACAGAGAGTGCGACATATACGGCACCATAGACTTCATCTTCGGGAACGCAGCCGTCGTTTTCCAAGCATGCGACATCGTTTCGAGGAAGCCGCTCCCTCACCAATTCACCGTCATCACAGCACAATCACGAGACAGCCCAGACGAAGACACCGGAATCTCCATCCAGAACTGCTCCATTATAGCCACCGAAGATCTCTACTCTGATTCTAGAAGCTTCAAGAGCTATTTGGGACGCCCGTGGAGGCCTTTTTCTCGTACTGTGTTACTGGAGTCGTATATTGATGACTTTGTGGACCCCAAGGGGTGGGCGAGGTGGTCCAATGAGGATGGTGAGGATGGGCTCGAGAGTTTGTATTATGGGGAGTACGAGAATTATGGGCCGGGCTCGAGTACGGATGGGAGGGTGAATTGGGTGGGCCACCATGTGATGGAGTATGAGGATGCTTATAATTTTACGGTTTCTAACTTCATTTTGGGTGATCAATGGCTTCAGTCCACTTCCTTTCCTTATGATGATGGGATTTGA 969 0.4902 LEEYGGEDVIVVAGDGTGNFSTINEAVNFAPNNSMERIVIYVKAGVYEENVEIPSYKTNLILLGDGTDVTLITANRSVADGWTTFRSATLAVSGEGFLARDIAIENKAGAEKHQAVALRVNADLTAFYRCAVYGFQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVFQACDIVSRKPLPHQFTVITAQSRDSPDEDTGISIQNCSIIATEDLYSDSRSFKSYLGRPWRPFSRTVLLESYIDDFVDPKGWARWSNEDGEDGLESLYYGEYENYGPGSSTDGRVNWVGHHVMEYEDAYNFTVSNFILGDQWLQSTSFPYDDGI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0690 322 Pfam Pectinesterase 10 308 IPR000070 GO:0030599|GO:0042545
Sto3g0690 322 ProSitePatterns Pectinesterase signature 2. 153 162 IPR033131 -
Sto3g0690 322 Gene3D - 6 322 IPR012334 -
Sto3g0690 322 PANTHER PECTINESTERASE 8 321 - -
Sto3g0690 322 PANTHER PECTINESTERASE 8 321 - -
Sto3g0690 322 SUPERFAMILY Pectin lyase-like 9 319 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0690 Sto-Chr3 4755571 4757286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0690 2 322 Carbohydrate Esterase AT2G26440 71.340 1.63e-174 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0690 - - gmx:102665651 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0690 3 4755571 4757286 Sto3g0690 3 4755571 4757286 ECH