Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0689 ATGGCGTTTCAAGACTTTGACCTCATCACCGAGAAAAGGAAAAACGACAGGAGACAGAAGCTGAAGCGTCGCATCGCCATCGGCGCCGTTTGCACCATCGTCGTCATCGGCCTCATAGGCGCAGCCGCTTTCGTAGTCGTCTCGAGGAACGAGGAAAACGAAGTAAACGATGGTACCAAGCCCGCATCAGATTCCACCAAACAGATCGCGCAAGGAGAGAAACTCGTGAAGACCATTTGCAGTTCCACCGACTACCAAGACAAATGCATGACGAGCCTTTCCAAAGAAGTCCAGAAGGACTCCAAACCCAAAGACGTCCTCAAGATTTCCATAACCGTGGCCCTCGAGGAAATCAGCAAGGCCATGAACAAAACCACGTCCTTCAACTTCCAATCGGAAAAGGAGAAAGGCGCTTTCGAGGATTGTAAGAAGCTTCTAGAAGACGCCAAGGAGGAGCTGGGTTTGTCTTCGTCGCGTGTTACTGCCGTGGAGGTGAGCAAGTTGGAGGAGAGTTCTTCGGATTTGAACAGCTGGCTCAGTGCGGTTATATCGTATCAGGAAACATGCATCGACGGCTTTGAGGAAGGCAAACTCAAGGATGATATTAAGAGTGCCTTTAAGGATTCCAAGGAGTATGTGAGTAACTCTCTGGCCATTGTCTCCAAGTTGGCATCCTTGCTTTCTACGCTAAAAGGAGGGAGTAGTCGTCGCTTAATGTCCACCTCATCAACGGATGAGGACGTGCCTGAATGGATCAACGATGAGGATCGTAGGATGTTGAAGGCGGCCGATGATAAGCCTACTCCTAATGTCACCGTGGCTAGTGATGGCAGTGGAAACTTCAAAACCATCTCCGAAGCTCTAAACGCCATTCCACAAAAATACACAGGACGGTACGTGGTTTATGTTAAAACAGGAACATATGCGGAAACAGTGACAATAGAGAAGCGAATGGCCAACGTAACCTTGTATGGTGATGGATCACAGAAGAGCATTATCACCGGTAACAAGAACTTCGTCGATGGAGTCAGAACTTTCCAAACTGCAACATTcgTGGTGCTAGGAGAAGGATTTCTAGGAAAAGCAATGGGGTTCAGGAACACAGCAGGACCCGAAAAGCACCAAGCAGTGGCAGCAAGAGTGCAAGCAGATCGTGCGGTGTTCGTGAACTGTCGTTTCGAAGGTTACCAAGACACACTGTACGCACAAACCCACAGGCAGTTCTACCGAAGCTGCGTGATCTCGGGCACAGTGGATTTCATCTTCGGCGACGCGGCGGCGGTGTTCCAGAACTGCATCCTCAACATACGCAAGCCCATGGACAACCAACAGAACATCGTGACCGCACAGGGGAGAGCCGACGAGCGACAAACAAGCGGCACCGTTTTGCAAAACTGCCAGATCAAGGCGGACGATTCGCTGGCGAGCGCGGAGAAAGGGAAATTCAAGAGCTACCTGGGAAGGCCGTGGAAGGAATATTCTAGAACCATCGTGATGGAATCGGAGATCGATGATGTGATAAGTCCCGAGGGATGGATGCCGTGGGAAGGAGACTTCGCACTCAAGACATTGTACTATGCCGAGTTTAATAATACCGGAAATGGCGCCAAAACTGATAGTAGAGTGAAGTGGGGAGGATACAAGGTGATTAAGAAGGAAGAGGCTGCCAAATTCACCGTCGAGAATTTCTTGGTCGGTGATTGGATTAGCTGGAACAGCGTCCCCGTTCAACGAGGCTTGTATAATTAA 1749 0.4974 MAFQDFDLITEKRKNDRRQKLKRRIAIGAVCTIVVIGLIGAAAFVVVSRNEENEVNDGTKPASDSTKQIAQGEKLVKTICSSTDYQDKCMTSLSKEVQKDSKPKDVLKISITVALEEISKAMNKTTSFNFQSEKEKGAFEDCKKLLEDAKEELGLSSSRVTAVEVSKLEESSSDLNSWLSAVISYQETCIDGFEEGKLKDDIKSAFKDSKEYVSNSLAIVSKLASLLSTLKGGSSRRLMSTSSTDEDVPEWINDEDRRMLKAADDKPTPNVTVASDGSGNFKTISEALNAIPQKYTGRYVVYVKTGTYAETVTIEKRMANVTLYGDGSQKSIITGNKNFVDGVRTFQTATFVVLGEGFLGKAMGFRNTAGPEKHQAVAARVQADRAVFVNCRFEGYQDTLYAQTHRQFYRSCVISGTVDFIFGDAAAVFQNCILNIRKPMDNQQNIVTAQGRADERQTSGTVLQNCQIKADDSLASAEKGKFKSYLGRPWKEYSRTIVMESEIDDVISPEGWMPWEGDFALKTLYYAEFNNTGNGAKTDSRVKWGGYKVIKKEEAAKFTVENFLVGDWISWNSVPVQRGLYN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0689 582 SMART PMEI_2 71 219 IPR006501 GO:0004857
Sto3g0689 582 CDD PMEI-like_3 78 225 - -
Sto3g0689 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 223 IPR006501 GO:0004857
Sto3g0689 582 Pfam Plant invertase/pectin methylesterase inhibitor 75 219 IPR006501 GO:0004857
Sto3g0689 582 Pfam Pectinesterase 270 567 IPR000070 GO:0030599|GO:0042545
Sto3g0689 582 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Sto3g0689 582 SUPERFAMILY Pectin lyase-like 268 569 IPR011050 -
Sto3g0689 582 Gene3D - 264 580 IPR012334 -
Sto3g0689 582 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 579 - -
Sto3g0689 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 223 IPR035513 -
Sto3g0689 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 225 IPR035513 -
Sto3g0689 582 PANTHER PECTINESTERASE 14 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0689 Sto-Chr3 4752773 4754734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0689 1 582 Carbohydrate Esterase AT2G26450 49.677 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0689 - - gmx:100784679 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0689 3 4752773 4754734 Sto3g0689 3 4752773 4754734 ECH