Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0675 ATGCTTCAGAAGTGGCAATCTGTTACCCTGGGCTCAAAGctcaatcatcatcatcataagaCGATTAATAAGGACATAGCTGCTGCCCCcataaacataattaaaaaagaagaagaagatgacacGTGGTGTGACTCGGAGGATGAGGAAATAATGGAGTCCACGACCAGCCCAAAGGTGGGACCCCCAGCGGATGTTCCAAAGGGATATCTGGCAGTGTACGTAGGGTGCGATCTTCAAAGGTTCATAATTCCCACGGCGTACCTTAGCCATTCCATATTCAAAGAGTTGTTGGAGAAAGCAGAAGATGAGTTTGGGTTTGAGCATAGTGGGGCCCTCACTATCCCTTGCGATATTCACACTTTCAAATCCCTCCTCACCTCTATGCACAATCCCCAACCCCATCCTACCTGCACCCTCACTACACCGCCTCATCCGCAACAAGCTCAAGAACCATTGATGGCGTGA 468 0.4444 MLQKWQSVTLGSKLNHHHHKTINKDIAAAPINIIKKEEEDDTWCDSEDEEIMESTTSPKVGPPADVPKGYLAVYVGCDLQRFIIPTAYLSHSIFKELLEKAEDEFGFEHSGALTIPCDIHTFKSLLTSMHNPQPHPTCTLTTPPHPQQAQEPLMA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0675 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 133 IPR003676 GO:0009733
Sto3g0675 155 PANTHER AUXIN-RESPONSIVE PROTEIN-LIKE PROTEIN 1 133 - -
Sto3g0675 155 Pfam Auxin responsive protein 60 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0675 Sto-Chr3 4633535 4634112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0675 1 131 Calmodulin-binding Proteins AT3G43120 54.198 4.55e-41 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0675 K14488 - csin:114314469 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0675 3 4633535 4634112 Sto3g0675 3 4633535 4634112 ECH