Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0657 ATGAAAGGGAGTAGTGGTAGTGGAAAGAAGCAGACTGGTTTGTCGCCTTGTGCTGCGTGTAAGCTTCTTCGAAGAATGTGTGATGAACAATGTGTGTTCGCTCCATATTTCCCAGCCCATCACCCTCACAAGTTCATTAATGTCCACAAAGTGTACGGTGCCAGTAACGTCAACAAGATGCTTCAGGAGCTACCCGTACATCAGCGAGGAGACGCAGTGAGCAGTATGGTGTATGAAGCCAACGCGCGAGTGCGAGACCCAGTGTATGGGTGCGTTGGTGCCATCTCTTCTCTTCAGCACCAACTTGATGGGCTTCGTGCCAAACTGGCTCTGGCCCAGGCCGAGGTGGCCCACCTCAGGATGCTTCCTAGCCCAACCACTTGTGCTGCCTCGGTCTCACCACCATCGCCCAACATTTTCATGGACTCCGACTCGCAACCCCAATCTATATTTGACATGGACATGTGGATACTGGATAGTGATGATGTGACTTATCCTGCGGCAACAATACATATGAAGGCAGGTTCTATTGCTATTTCAACTGTTTTGATAATGGATGATGTTTCTCAGTGA 573 0.4974 MKGSSGSGKKQTGLSPCAACKLLRRMCDEQCVFAPYFPAHHPHKFINVHKVYGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQHQLDGLRAKLALAQAEVAHLRMLPSPTTCAASVSPPSPNIFMDSDSQPQSIFDMDMWILDSDDVTYPAATIHMKAGSIAISTVLIMDDVSQ 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0657 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 153 - -
Sto3g0657 190 Coils Coil 95 122 - -
Sto3g0657 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 8 153 - -
Sto3g0657 190 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Sto3g0657 190 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0657 Sto-Chr3 4455680 4457115 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0657 7 124 AS2 family AT1G31320 77.966 4.15e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto3g0657 LOB 1.2e-40 No_clan