Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0655 ATGTGCGACATCACCAAATCTGCTTCTGATGGTGGGCGTTCCGGATGGGATGATGTGGGTGGTCTAGTTGACATTCGAAATGCTACCAAGGAGATGATAGAGTTGCCTTCAAAGTTTCCGAAAACCTTTGCGCAAGCTCCTTTAAGGTTACAATCAAATGTCCTTTTATATGGGCCTCCTGGTTGTGGAAAAACTCACATAGTTGGTGCTGCTGCTTGTTCACTACGGTTCATATCAGTGAAAGGGCCAGAGCTATTAAACAAATACATTGGTGCTTCTGAACAAGCTTTACCAATGGCCAGTGATGTTGATTTGGCCGCAGTTGCTCATATGACTGAAGGATTCAGTGGACTTGATCTCCAAGCTCTCCTTTCCGATGCTCAACTTGCAGCAATTCATGAAGTTCTGGATAACGTAGACACCCATTGGCAAGAGAAAACACCACTTATTACGGATGCTCTTCTCAAGTTTACTGCCTCTGTGGTTAGACCATCTGTTTCCGATGAAGAGAAACGAAGACTCTACAATATTTACAGCCAGTTCCTCAATTCAAAGAGATCCGTTGCCGCTCAGAATGTTCCTCTTCCGGTATTTGGAAAGACTCTTTGCTATGCTAATGCCTTTTCTGATGTGGATGACATTATTGTTGCAGTCAAGAGATGCAAAAGGCAGGAGGGCAACTCTAGCGTGACCATCAGgtga 702 0.4416 MCDITKSASDGGRSGWDDVGGLVDIRNATKEMIELPSKFPKTFAQAPLRLQSNVLLYGPPGCGKTHIVGAAACSLRFISVKGPELLNKYIGASEQALPMASDVDLAAVAHMTEGFSGLDLQALLSDAQLAAIHEVLDNVDTHWQEKTPLITDALLKFTASVVRPSVSDEEKRRLYNIYSQFLNSKRSVAAQNVPLPVFGKTLCYANAFSDVDDIIVAVKRCKRQEGNSSVTIR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0655 233 Gene3D - 15 95 IPR027417 -
Sto3g0655 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 173 IPR027417 -
Sto3g0655 233 CDD AAA 46 94 - -
Sto3g0655 233 PANTHER PEROXISOME BIOGENESIS FACTOR 1 8 96 IPR025653 GO:0005524|GO:0005778|GO:0006625|GO:0016887
Sto3g0655 233 PANTHER PEROXISOME BIOGENESIS FACTOR 1 96 182 IPR025653 GO:0005524|GO:0005778|GO:0006625|GO:0016887
Sto3g0655 233 PANTHER AAA-FAMILY ATPASE 8 96 - -
Sto3g0655 233 PANTHER AAA-FAMILY ATPASE 96 182 - -
Sto3g0655 233 Pfam AAA+ lid domain 102 140 IPR041569 -
Sto3g0655 233 Pfam ATPase family associated with various cellular activities (AAA) 54 97 IPR003959 GO:0005524|GO:0016887
Sto3g0655 233 Gene3D - 96 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0655 Sto-Chr3 4428455 4432875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0655 16 97 Calmodulin-binding Proteins AT3G56690 42.857 1.85e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0655 K13338 - gmx:100803882 178.718