Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0654 ATGGTGTATGAAGCCAACGCGCGAGTGCAAGACCCAGTGTATGGGTGCGTTGGTGCCATCTCTTCTCTTCAGCACCAACTTGATGGGCTTCGGGCCCAACTGGCTCTGGCCCAGGCCGAGGTGGCCCACCTCAGGATGCTTCCTAGCCCAACCACTTGTGCTGCCTCGTGGATACTGGATAGTGATGATGTGACTTATCCTGCGGCAACAATACATATGAAGGCAGGTTCTATTGCCATTTCAACTGTTTTGATAATGGATGTTGTTTCTCAGTGA 276 0.5181 MVYEANARVQDPVYGCVGAISSLQHQLDGLRAQLALAQAEVAHLRMLPSPTTCAASWILDSDDVTYPAATIHMKAGSIAISTVLIMDVVSQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0654 91 ProSiteProfiles LOB domain profile. 1 41 IPR004883 -
Sto3g0654 91 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 55 - -
Sto3g0654 91 Pfam Lateral organ boundaries (LOB) domain 1 38 IPR004883 -
Sto3g0654 91 Coils Coil 20 47 - -
Sto3g0654 91 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0654 Sto-Chr3 4425181 4426033 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0654 1 68 AS2 family AT1G16530 54.054 1.41e-19 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto3g0654 LOB 4.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0654 - - mdm:103445802 87.0409