LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g0652	ATGTCGGTCGGCGTCCGCTGCTTAACGGTGCTCGGGGAATTTAAGCCGTTTGGCTTGATTGCTGAAGCTCTAGACGGAAAACCTTCCGATATAGTTACTGACAAGTACGATTATTTCCTTTTCGACCCTGAAGTCGCTCGAGACCGAGACGAGGAAGATAACTATGACGAGGCTGCTTCCGCATTGTGTAATCAGGGTGATCACGAGCTATTCATCAGAGGGAACCGGATTATATGGTCGACGGGTTCAAGGGTTTTTAAGAGATTTACTTTGCGTTCCCCTGTTGTTatgGTATGCTGGTCTTGTCTGGGTCATACATCTGAAGCTCTTCTGTGCATATTACAGATAGATTGTTTGACAATCTATAATACCTCAGGAGAAGTAGTATCTCTTCCACTTCCTTGTACAATCTCATCTATATGGCCTCTTCCATTTGGTTTATTACTCCAGCAGGAGGTTGAAGCAAATATACCATCATCTGTTCCCTTTTCATCGTTGAGCCCTTTGCTAAGTACACGTGAGTCTTGGCGCCCAAGAAGAGAACTTGGTCACAGTCCACAACATTGTTTTAGTCCCTTTTCTGCACTCAATCATATCCAAAAGGGAGAGGCGACTTCAATATCATCACATCTCATTTTCATGGATACTCTGGATGAACAACAACCAACTTTTATTGAAGAAAGAGGGAAATTGAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGATCTGGTCCCTCTTATGGCATCCTATAATAAAGGAAAGATGCAGCACTCTCTGTGGGTTGCAGAAATCATTAGTTCTAACCTTGATGAAGTAGACACCAGTTTATTAAATGTAGATCCTGCAGGTGTAGTGCCGAAATATTTGTCCTTCGTAGAATATGGCCAGGAAAAGGTGCCCATACAGCTGCTTGTTTTCATGGCTACTGATGATGATGCAGCTCCTTTGGTCTGCTTTCTTTACCAAGAACAGAGAAAATTGTTATCTGTGAGGCTTCAGAGTgttgaaataaataatgaaatttcCTTTGACGTTAAACCTGATATGAGCTGGAGCATACCTGCAATTTCAGCTTCACCTGTGATTGTAACTCAGCCAAGAGTGAAAGTTGGACCGCTGCCATATTCAGACATTTTGGTTTTAGCTCCAGAAAATGTTCTGCATCTCTATGGAGTTATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCCACTAGAAAAACCTTCGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCCGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTAAAGGCTACCAGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACTCGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCAAGAATTGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAACCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGTATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAAGCTATGGAGGCAGAATCAAAAATAATTCAGTTGAAGACTTCCATGCAAAGGCTTGAAGAGAAGTTCTCAAATATTGAATCTGAAAACCAAGTTCTGTAG	2076	0.4143	MSVGVRCLTVLGEFKPFGLIAEALDGKPSDIVTDKYDYFLFDPEVARDRDEEDNYDEAASALCNQGDHELFIRGNRIIWSTGSRVFKRFTLRSPVVMVCWSCLGHTSEALLCILQIDCLTIYNTSGEVVSLPLPCTISSIWPLPFGLLLQQEVEANIPSSVPFSSLSPLLSTRESWRPRRELGHSPQHCFSPFSALNHIQKGEATSISSHLIFMDTLDEQQPTFIEERGKLNIMKEYDEKTIWTSDLVPLMASYNKGKMQHSLWVAEIISSNLDEVDTSLLNVDPAGVVPKYLSFVEYGQEKVPIQLLVFMATDDDAAPLVCFLYQEQRKLLSVRLQSVEINNEISFDVKPDMSWSIPAISASPVIVTQPRVKVGPLPYSDILVLAPENVLHLYGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYSAKLHFRKLKKATITTQCAWRGKIARQELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEREAAKRAAEIVPTIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGETEKRYEEANKISEERLKQAMEAESKIIQLKTSMQRLEEKFSNIESENQVL	691

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g0652	691	SMART	MYSc_2a	153	473	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Sto3g0652	691	Coils	Coil	643	687	-	-
	Sto3g0652	691	Coils	Coil	576	596	-	-
	Sto3g0652	691	PANTHER	BNAC02G02260D PROTEIN	1	395	-	-
	Sto3g0652	691	Coils	Coil	523	557	-	-
	Sto3g0652	691	ProSiteProfiles	Myosin motor domain profile.	395	472	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Sto3g0652	691	PANTHER	MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER	1	395	IPR024990	GO:0005680
	Sto3g0652	691	Gene3D	-	475	528	-	-
	Sto3g0652	691	Pfam	Myosin head (motor domain)	391	460	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Sto3g0652	691	ProSiteProfiles	IQ motif profile.	500	529	IPR000048	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto3g0652	Sto-Chr3	4401886	4408526	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto3g0652	421	691	Myosins gene family	AT1G04160	58.571	6.62e-84	287

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g0652	K03348		-	gmx:100818647	565.459

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