Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0652 ATGTCGGTCGGCGTCCGCTGCTTAACGGTGCTCGGGGAATTTAAGCCGTTTGGCTTGATTGCTGAAGCTCTAGACGGAAAACCTTCCGATATAGTTACTGACAAGTACGATTATTTCCTTTTCGACCCTGAAGTCGCTCGAGACCGAGACGAGGAAGATAACTATGACGAGGCTGCTTCCGCATTGTGTAATCAGGGTGATCACGAGCTATTCATCAGAGGGAACCGGATTATATGGTCGACGGGTTCAAGGGTTTTTAAGAGATTTACTTTGCGTTCCCCTGTTGTTatgGTATGCTGGTCTTGTCTGGGTCATACATCTGAAGCTCTTCTGTGCATATTACAGATAGATTGTTTGACAATCTATAATACCTCAGGAGAAGTAGTATCTCTTCCACTTCCTTGTACAATCTCATCTATATGGCCTCTTCCATTTGGTTTATTACTCCAGCAGGAGGTTGAAGCAAATATACCATCATCTGTTCCCTTTTCATCGTTGAGCCCTTTGCTAAGTACACGTGAGTCTTGGCGCCCAAGAAGAGAACTTGGTCACAGTCCACAACATTGTTTTAGTCCCTTTTCTGCACTCAATCATATCCAAAAGGGAGAGGCGACTTCAATATCATCACATCTCATTTTCATGGATACTCTGGATGAACAACAACCAACTTTTATTGAAGAAAGAGGGAAATTGAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGATCTGGTCCCTCTTATGGCATCCTATAATAAAGGAAAGATGCAGCACTCTCTGTGGGTTGCAGAAATCATTAGTTCTAACCTTGATGAAGTAGACACCAGTTTATTAAATGTAGATCCTGCAGGTGTAGTGCCGAAATATTTGTCCTTCGTAGAATATGGCCAGGAAAAGGTGCCCATACAGCTGCTTGTTTTCATGGCTACTGATGATGATGCAGCTCCTTTGGTCTGCTTTCTTTACCAAGAACAGAGAAAATTGTTATCTGTGAGGCTTCAGAGTgttgaaataaataatgaaatttcCTTTGACGTTAAACCTGATATGAGCTGGAGCATACCTGCAATTTCAGCTTCACCTGTGATTGTAACTCAGCCAAGAGTGAAAGTTGGACCGCTGCCATATTCAGACATTTTGGTTTTAGCTCCAGAAAATGTTCTGCATCTCTATGGAGTTATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCCACTAGAAAAACCTTCGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCCGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTAAAGGCTACCAGATTGGTAAAACAAAGGTATTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAAGCCAATGCCGGAAATACTCGGCAAAACTTCACTTTAGGAAGTTAAAGAAAGCCACTATTACAACACAATGTGCATGGAGAGGAAAAATTGCCCGGCAAGAATTGCGGAAACTCAAGatgGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTGACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATGCAACTTCAGTTTAAAGAAACTAAGGCATTGCTTGAAAAGGAGCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAACCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGTATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAAGCTATGGAGGCAGAATCAAAAATAATTCAGTTGAAGACTTCCATGCAAAGGCTTGAAGAGAAGTTCTCAAATATTGAATCTGAAAACCAAGTTCTGTAG 2076 0.4143 MSVGVRCLTVLGEFKPFGLIAEALDGKPSDIVTDKYDYFLFDPEVARDRDEEDNYDEAASALCNQGDHELFIRGNRIIWSTGSRVFKRFTLRSPVVMVCWSCLGHTSEALLCILQIDCLTIYNTSGEVVSLPLPCTISSIWPLPFGLLLQQEVEANIPSSVPFSSLSPLLSTRESWRPRRELGHSPQHCFSPFSALNHIQKGEATSISSHLIFMDTLDEQQPTFIEERGKLNIMKEYDEKTIWTSDLVPLMASYNKGKMQHSLWVAEIISSNLDEVDTSLLNVDPAGVVPKYLSFVEYGQEKVPIQLLVFMATDDDAAPLVCFLYQEQRKLLSVRLQSVEINNEISFDVKPDMSWSIPAISASPVIVTQPRVKVGPLPYSDILVLAPENVLHLYGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKSQCRKYSAKLHFRKLKKATITTQCAWRGKIARQELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDMEEAKTQENKRLQSSLHEMQLQFKETKALLEKEREAAKRAAEIVPTIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGETEKRYEEANKISEERLKQAMEAESKIIQLKTSMQRLEEKFSNIESENQVL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0652 691 SMART MYSc_2a 153 473 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g0652 691 Coils Coil 643 687 - -
Sto3g0652 691 Coils Coil 576 596 - -
Sto3g0652 691 PANTHER BNAC02G02260D PROTEIN 1 395 - -
Sto3g0652 691 Coils Coil 523 557 - -
Sto3g0652 691 ProSiteProfiles Myosin motor domain profile. 395 472 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g0652 691 PANTHER MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER 1 395 IPR024990 GO:0005680
Sto3g0652 691 Gene3D - 475 528 - -
Sto3g0652 691 Pfam Myosin head (motor domain) 391 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto3g0652 691 ProSiteProfiles IQ motif profile. 500 529 IPR000048 GO:0005515
Sto3g0652 691 Pfam Anaphase-promoting complex subunit 1 WD40 beta-propeller domain 110 273 IPR024990 GO:0005680
Sto3g0652 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 533 IPR027417 -
Sto3g0652 691 Gene3D - 406 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0652 Sto-Chr3 4401886 4408526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0652 421 691 Myosins gene family AT1G04160 58.571 6.62e-84 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0652 K03348 - gmx:100818647 565.459