Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0592 atgGGTGATTCATTCACTGGgggATCAGGCAGGCTGGCTAATCCTTGGTGGACAGGTCAGGTTGGGCTGGCGGGAGTGGGATCAGTAGAGCCGTCCCCCCCAGCCCTCACCAAGCGCCACACCGATCTCACCATCAACGACACCCGCGATGACGACGACAACGGAGACGAGCCCAAGGAGGGTGCTGTCGATGTGGGAGCCTTTCTCCCCGGACCCGCCCCTCCCGGCTCCACCGGCCTCACCGTCTACCTCGCCGGAGGCCAAGGCCAGGTCGTCGGAGGCAGCGTCGTTGGCTCTCTCGTGGCGGCCGGCCCGGTGATGGTGATTGCGGCCACCTTTGCGAATGCCACGTACGAGAGACTGCCACtggatgaggaggaggaggggggaAGTGGGGCGGCGCAGGGAGGCTCGCCGCCCGGAATAGGGAGCAGTGGGGGGATTCCGGATCCGTCGTTGTACAATCTGGCGCCGAATCTGGTGGCTAACGGAGGAGGAGGCCAAGTGGGGCATGAGGCTTTTGGTTGGCCCGGTCATGGAAGGCCGCCACCTTActga 558 0.6129 MGDSFTGGSGRLANPWWTGQVGLAGVGSVEPSPPALTKRHTDLTINDTRDDDDNGDEPKEGAVDVGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDEEEEGGSGAAQGGSPPGIGSSGGIPDPSLYNLAPNLVANGGGGQVGHEAFGWPGHGRPPPY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0592 185 Pfam Plants and Prokaryotes Conserved (PCC) domain 65 114 IPR005175 -
Sto3g0592 185 PANTHER DNA-BINDING PROTEIN-LIKE 66 183 - -
Sto3g0592 185 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 66 183 IPR014476 GO:0003680
Sto3g0592 185 MobiDBLite consensus disorder prediction 24 62 - -
Sto3g0592 185 SUPERFAMILY AF0104/ALDC/Ptd012-like 57 126 - -
Sto3g0592 185 MobiDBLite consensus disorder prediction 124 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0592 Sto-Chr3 3944506 3945953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0592 65 183 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.844 5.00e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0592 - - gmx:102663643 135.576