Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0576 ATGAGTTTGATCTTCCTCACGGAGAGATCTAAGACACTCAGAGAAGAACCCCCTTTCTCTGCCTTTCCCTTGCCTTCTTCTGATATGGATCTCTCGCCATTACCAAGTCCAGCCGCTGCAATTCTTCACCCGCATTCCCATTCTGCAACCACCAGTTTCCCCATTATAGCCATCGCTATCATAGGAATACTAGCCACTGCTTTCTTGCTGGTTAGCTACTACATCTTCGTCATCAAATGCTGCCTCACCTGGCACCGCATAGATCTCTTGAGACGCTTCTCGCCGTCCCGGCGGCGGGAGGAGCAGCTGCCGATTTACTCGCCGGCGAGAACAGAGGCTCGAGGGCTGGACGAGGCGGTGATCCGGTTAATCCCAGTGATCCAATACAGAGCAGAGGAAAACAGAGGAGCGGAATGCCCTGTTTGCTTGAGCGAGTTTCGCGAGAAGGAGAAGCTGAGGATGATACCCAATTGCAGCCACGTGTTCCACATAGATTGCATCGACGTTTGGCTTCAGAACAACGCCAATTGCCCACTTTGCAGAACCAGTATTTCCTTAACAAGCCGATTCCAAATCGAGCAGATTCTCAGCGCAAGAACCCTCTCGCAAGATCGAAGGCCGTACGGCGAAAATCCCATTGGAGGGGATGAGGATTTTGTCGTGATTGAACTGGGTAGCTACAACACGGAAACGCAAGAGAGGGAGAACCCAGTGTTGGAGGCACATGCTGCACGTGGTGTGAATGTGACTGTGAGTCCTTCGCCCAGGAAGATTATGGAGCAGAAGAAGATAGGAAGGAAGGTTCAGAAAGTGACGAGCATGGGGGATGAGTGTATtgatattagagagaaagatgAGCAATTTTCAGTACAACCCATAAGAAGGTCTTTCTCAATGGATTCTTCAGGGGATAGGCAATTCTATTTGGCAGTTCAAGAGGCCTTGAAGAAACACAAGAAGCAAGAAGTCAATGAggtttcctcctcctcctccaccgTCATTGAAGGGTGTGGTGGTAGAGCCAAGAGATCATTCTTTTCCTTTGGACATGGTAGTAGTAGATCCAGAAGTTCAGTGCTACCTGTTTATTTGGACCACTAA 1101 0.4741 MSLIFLTERSKTLREEPPFSAFPLPSSDMDLSPLPSPAAAILHPHSHSATTSFPIIAIAIIGILATAFLLVSYYIFVIKCCLTWHRIDLLRRFSPSRRREEQLPIYSPARTEARGLDEAVIRLIPVIQYRAEENRGAECPVCLSEFREKEKLRMIPNCSHVFHIDCIDVWLQNNANCPLCRTSISLTSRFQIEQILSARTLSQDRRPYGENPIGGDEDFVVIELGSYNTETQERENPVLEAHAARGVNVTVSPSPRKIMEQKKIGRKVQKVTSMGDECIDIREKDEQFSVQPIRRSFSMDSSGDRQFYLAVQEALKKHKKQEVNEVSSSSSTVIEGCGGRAKRSFFSFGHGSSRSRSSVLPVYLDH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0576 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 186 IPR013083 -
Sto3g0576 366 PANTHER RING-H2 FINGER PROTEIN ATL16 36 365 - -
Sto3g0576 366 Pfam Ring finger domain 138 181 IPR001841 -
Sto3g0576 366 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Sto3g0576 366 CDD RING-H2_EL5_like 138 181 - -
Sto3g0576 366 SUPERFAMILY RING/U-box 126 187 - -
Sto3g0576 366 PANTHER RING-H2 FINGER PROTEIN ATL16 36 365 IPR044600 GO:0016567|GO:0016740
Sto3g0576 366 SMART ring_2 139 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0576 Sto-Chr3 3856650 3858343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0576 42 365 C3H Transcription Factor Family AT1G04360 50.000 1.68e-98 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0576 3 3856650 3858343 Sto3g0576 3 3856650 3858343 ECH