Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0574 ATGGAGGAAGGAGGAGGAAAGGGGAAGGAGTACGTAGAAGGCGGGGCCCCCGACGTGCGGTACCGGGGGGTTAGACGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATCAGGGACTCGACTCGGCAGGGGCAGAGGGTGTGGCTGGGGACATTTAACACGGCGGAGGAAGCAGCGAGAGCCTATGATAGAGCTGCTTATGCGATGAGAGGGCCATTTGCAATACTGAACTTTCCAGACGAATATCCAGTTTCAGCAGGAGGTGCTAATAATACTGCGACAACTACTCATCAACCTCCTATCTCTCATACTCATAATtcctctgcttctgcttctgcttcttcttcttcgaggGGTACTCATCATAGACAAGTCTTCGAGTTCGAGTACTTGGATGACAAATTGTTGGAGGAGCTTCTTGATTATGATCATGACAACAAGAATAAGGGAAAGGAAGGGAAGCATTATATTGATGctagaaggtag 483 0.4596 MEEGGGKGKEYVEGGAPDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGPFAILNFPDEYPVSAGGANNTATTTHQPPISHTHNSSASASASSSSRGTHHRQVFEFEYLDDKLLEELLDYDHDNKNKGKEGKHYIDARR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0574 160 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 MobiDBLite consensus disorder prediction 83 119 - -
Sto3g0574 160 MobiDBLite consensus disorder prediction 86 119 - -
Sto3g0574 160 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677
Sto3g0574 160 MobiDBLite consensus disorder prediction 140 160 - -
Sto3g0574 160 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Sto3g0574 160 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Sto3g0574 160 PANTHER DNA-BINDING DOMAIN 7 143 IPR044808 GO:0003700|GO:0009873
Sto3g0574 160 PANTHER ETHYLENE RESPONSE FACTOR 7 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0574 Sto-Chr3 3849800 3850514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0574 20 140 AP2-EREBP Transcription Factor Family AT3G23230 60.331 3.97e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto3g0574 AP2 2.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0574 - - gmx:100775830 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0574 3 3849800 3850514 Sto3g0574 3 3849800 3850514 ECH