Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto3g0573 | ATGGATGATCATAATATTGGAGGAGGgcagaaggagaaggaggaggtGAGGTACCGGGGAGTGAGGCGACGGCCGTGGGGGAAATACGCGGCGGAGATAAGGGATCCATCGAAGCAAGGGGCGAGGCTGTGGCTAGGCACCTTCGATACGGCGGAGGAAGCAGCCAGAGCCTATGATAGAGCTGCCTTTAACTTGAGGGGTCATCTTGCAATCCTCAATTTCCCTAACGAGTATTATTCTCAAATCAGGGGATCTCCACCATATCCTCCCTAtttggcttcttcttcttcttcttcttcttcttcagtagTTCATCAGAATCATCAGAGGCAAGTGTTTGAGTTCGAGTGTTTGGATAATCAGGTGTTGGAGGACCTTCTTCAATCcgaagaggacaagaagaaaAACAAGTGA | 414 | 0.4082 | MDDHNIGGGQKEKEEVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPYLASSSSSSSSSVVHQNHQRQVFEFECLDNQVLEDLLQSEEDKKKNK | 137 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto3g0573 | 137 | CDD | AP2 | 17 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | Gene3D | AP2/ERF domain | 16 | 77 | IPR036955 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | PANTHER | ETHYLENE RESPONSE FACTOR | 1 | 131 | - | - | |
Sto3g0573 | 137 | SMART | rav1_2 | 17 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | SUPERFAMILY | DNA-binding domain | 17 | 76 | IPR016177 | GO:0003677 | |
Sto3g0573 | 137 | ProSiteProfiles | AP2/ERF domain profile. | 17 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | PANTHER | DNA-BINDING DOMAIN | 1 | 131 | IPR044808 | GO:0003700|GO:0009873 | |
Sto3g0573 | 137 | PRINTS | Ethylene responsive element binding protein signature | 18 | 29 | IPR001471 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | PRINTS | Ethylene responsive element binding protein signature | 41 | 57 | IPR001471 | GO:0003700|GO:0006355 | |
Sto3g0573 | 137 | Coils | Coil | 120 | 137 | - | - | |
Sto3g0573 | 137 | Pfam | AP2 domain | 17 | 68 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto3g0573 | Sto-Chr3 | 3831580 | 3831993 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto3g0573 | 12 | 134 | AP2-EREBP Transcription Factor Family | AT3G23230 | 68.254 | 2.48e-53 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Sto3g0573 | AP2 | 4.2e-17 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto3g0573 | - | - | gmx:100776376 | 198.364 |