Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0573 ATGGATGATCATAATATTGGAGGAGGgcagaaggagaaggaggaggtGAGGTACCGGGGAGTGAGGCGACGGCCGTGGGGGAAATACGCGGCGGAGATAAGGGATCCATCGAAGCAAGGGGCGAGGCTGTGGCTAGGCACCTTCGATACGGCGGAGGAAGCAGCCAGAGCCTATGATAGAGCTGCCTTTAACTTGAGGGGTCATCTTGCAATCCTCAATTTCCCTAACGAGTATTATTCTCAAATCAGGGGATCTCCACCATATCCTCCCTAtttggcttcttcttcttcttcttcttcttcttcagtagTTCATCAGAATCATCAGAGGCAAGTGTTTGAGTTCGAGTGTTTGGATAATCAGGTGTTGGAGGACCTTCTTCAATCcgaagaggacaagaagaaaAACAAGTGA 414 0.4082 MDDHNIGGGQKEKEEVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPYLASSSSSSSSSVVHQNHQRQVFEFECLDNQVLEDLLQSEEDKKKNK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0573 137 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Sto3g0573 137 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Sto3g0573 137 PANTHER ETHYLENE RESPONSE FACTOR 1 131 - -
Sto3g0573 137 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Sto3g0573 137 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Sto3g0573 137 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Sto3g0573 137 PANTHER DNA-BINDING DOMAIN 1 131 IPR044808 GO:0003700|GO:0009873
Sto3g0573 137 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Sto3g0573 137 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Sto3g0573 137 Coils Coil 120 137 - -
Sto3g0573 137 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0573 Sto-Chr3 3831580 3831993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0573 12 134 AP2-EREBP Transcription Factor Family AT3G23230 68.254 2.48e-53 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto3g0573 AP2 4.2e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0573 - - gmx:100776376 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0573 3 3831580 3831993 Sto3g0573 3 3831580 3831993 ECH