Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0562 atgagCTCAGAACTGGAACGAGACTACGTCGTTTTAATGGAGGTAGGGCGGGGTAAATTCGGCACCGTTTACAAGTGTACATCCCGGAGCTCCGACGAGGATCATCAGATCTTCGCCGTCAAATCGATCGACAAGCAGGTGGTCACTGCCGGCGACTCCCTCGACGCGCAATGCCTCTTCAACGAGCCTAAGATCATGAAGCTCCTCTCCCCCCACCCTAACATCCTCACCATCCACAACGTCTACGAGGACGACAATCACCTCCACATGGTCTTCGACTTCTGCGATCACTCCGATCTCCACGACCGGATTAGCGCCACCGTACCGGAATCCGACGCCTCTCGGATCATGCGCCAGCTGATGCAAGCCGTTTGTCACTGCCACCGCCTAGGCGTGGCTCACCGCGACATCAAGCCGGGGAATATACTGTTCGAGGGGGAGCCTGAGAGGCTGAAGCTTGCGGACTTCGGGTCGGCTGAGATATTCAAGGAGGGGGAGAAGATGAGGGGGGTGGTGGGGACCCCCTATTACGTGGCGCCGGAAGTGGTGGGCGGAAGGGAGTACAACGAGAAGGTGGATGTGTGGAGCGCGGGTGTGATTTTGTACATAATGTTGTCTGGAGGTCCGCCCTTCGACGGCGAAACCGAGGTGGACATTTTTGAGGCGGTGCTTAGAGCCAATTTGAGATTCCCGTCCCGTTTTTTTCATTCCGTTTCGCCGGCGGCCAAGGATCTCCTCCGAAGAATGCTCTGTAAAGACATTTCCAGGAGGTTTTCGGCCGAGCAAGTGCTCAGACACCCATGGTTTAGCATTGCAGAGAGCATGGCAAGAGCAACTGCTATTAGAAAGGCAAGCAACAGATCTGATCATGACAAATATGTAAAGGGAGCAGTTCTAGCATCAACTTCAGTGGCTTCTTCCTCAGCTTCACCAGACATTTCCTCCAGCGATTTTCCTTTAGATTCAGGCACCAAGAAAGTGAAAATCATCCCCAAGAAGTTAACCACACCCAAAGTTATCAGAGTATTTTTCACCCCAATGCTGTCTTTGGCATATACAAAGCCAAAAGCACCCACTATGGCCCCAGCCTTCCCAGATGCTGCTGATATGCCATGGCAGGTTGACCTTAGCCTCGCCGGGAAGATCTCTGCCGGAACCACGAATGTGGTAGCATTGGGACCGAAATTGGCGAAAAAGAAGGTCAACGAGTACATTACAACAAACCCAATTCTGTTGCACTGTGCTGCAAAGAGCTATGAGGGTCTGAGCTCTGGCAATTCTGTAAACTTCTTCCAGTGCACTCATGGTTTTGGCTTCAGGAATCCACCCAATGGCAGAGAAGATGTCTTTCTGGAACAGGTTCTGGCTGTAGAAGGCAATGTCCAGAAGAAACCAAGTGGTGGTGGTTCCCAACAAGTGAAGGCCATGACGGAGAAGGAATTGCCTTGA 1449 0.521 MSSELERDYVVLMEVGRGKFGTVYKCTSRSSDEDHQIFAVKSIDKQVVTAGDSLDAQCLFNEPKIMKLLSPHPNILTIHNVYEDDNHLHMVFDFCDHSDLHDRISATVPESDASRIMRQLMQAVCHCHRLGVAHRDIKPGNILFEGEPERLKLADFGSAEIFKEGEKMRGVVGTPYYVAPEVVGGREYNEKVDVWSAGVILYIMLSGGPPFDGETEVDIFEAVLRANLRFPSRFFHSVSPAAKDLLRRMLCKDISRRFSAEQVLRHPWFSIAESMARATAIRKASNRSDHDKYVKGAVLASTSVASSSASPDISSSDFPLDSGTKKVKIIPKKLTTPKVIRVFFTPMLSLAYTKPKAPTMAPAFPDAADMPWQVDLSLAGKISAGTTNVVALGPKLAKKKVNEYITTNPILLHCAAKSYEGLSSGNSVNFFQCTHGFGFRNPPNGREDVFLEQVLAVEGNVQKKPSGGGSQQVKAMTEKELP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0562 482 ProSitePatterns Protein kinases ATP-binding region signature. 15 41 IPR017441 GO:0005524
Sto3g0562 482 Pfam Protein kinase domain 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0562 482 ProSiteProfiles Protein kinase domain profile. 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0562 482 SMART serkin_6 9 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0562 482 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Sto3g0562 482 CDD STKc_CAMK 8 268 - -
Sto3g0562 482 Gene3D Transferase(Phosphotransferase) domain 1 98 315 - -
Sto3g0562 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Sto3g0562 482 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 4 274 - -
Sto3g0562 482 MobiDBLite consensus disorder prediction 461 482 - -
Sto3g0562 482 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 274 - -
Sto3g0562 482 SUPERFAMILY Protein kinase-like (PK-like) 6 270 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0562 Sto-Chr3 3733528 3739139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0562 4 274 EF-hand Containing Proteins AT3G57530 43.841 4.06e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto3g0562 Pkinase 9.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0562 - K08794 mnt:21404279 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0562 3 3733528 3739139 Sto3g0562 3 3733528 3739139 ECH