Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0549 ATGGAAGCTACAAGGTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAAATCAAGTCTCCAAAGAACAAGGAATCCACAGTCTCCACAAAAGAAGGGTCAAGACCACCAACAAATGAAGAAGCACCTTCCAATGTGACCAAACAGAAGGCTGCAGCCGCAAAGCAATACATAGAAAATCATTATAAGAAGCAGATGAAGAGCCTGCAGGAGAGGAAAGAACGACGTAACATGCTAGAGAAAAAGCTGGCTGATGCTGAAGTCTCTGAAGAAGAGCAGAACAACTTGCTTAAATATTTGGAGAAAAAGGAAACAGAATACATGCGCCTTCAGAGGCATAAGATGGGAGCTGATGATTTTGAGCCGTTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTTTGCCGAGAGAAGGCAACTGGTCATGTATACGCTATGAAAAAGCTGAAGAAATCTGAGATGCTTCGCAGAGGCCAGgttgAACATGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGTAATTGCATTGTAAAACTTTACTGCTCCTTTCAAGATGAAGAGTATTTATATCTCATTATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTTATGCGGAAAGATACACTGACAGAAGATGAGGCTAGGTTCTATGTTGGGGAGACTGTCCTAGCTATTGAGTCAATTCATAAACACAATTATATTCATAGAGATATCAAGCCTGATAACTTGCTGCTGGATAGACATGGCCACATGAAATTATCAGATTTTGGATTATGTAAGCCACTAGACTGCAGTAATCTTCAGGAGAAGGATTTTTCCATTGGAAGCAACCTAAGCGGAGCTCTTAAGAGCGATGGACGTCCTGTGGCTCCTAAACGAACTCAACAAGAGCAACTTCAGCATTGGCAGAAGAATAGGCGAATGCTTGCCTATTCTACAGTTGGAACACCTGACTATATTGCCCCAGAAGTTCTTCTGAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCATTGGGTGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCAGATGAACCAATGTCAACTTGCAGAAAGATAGTAAATTGGAGAACCCATTTAAAATTCCCAGAAGAAGCTAAACTATCTGCAGAGGCAAAGGATCTTATTTGTAGACTCCTTTGTAATGTGGACCAGCGGCTTGGTACTAAAGGGGCAGATGAGATAAAGGCTCACCCATGGTTCAAAGGGATTGAATGGGACAAACTGTACCAAATGAAAGCTGCATTCATTCCTGAGGTTAATGATGAATTAGATACtcaaaattttgagaagttTGAAGAgGTTGACAACCAAACTCAGCCTTCCTCAAAATCAGGCCCATGGAGAAAGATGTTGTCATCTAAAGACATTAACTTTGTTGGGTACACTTATAAGAACTTTGAAATTGTGAATGATCATCAACTACCTGGAATTGCtgaattgaagaagaagagcacAAAAACTAAAAGACCGTCTATTAAGACTCTGTTTGATGATGAGTCCAGTAAGGAAGCCAATCAACCGGTCCAGGGAAGCTTCTTAAACCTCTTACCTACGCAACCGGAAGTTCCGGAGAAAAGTGAATCACAATGA 1644 0.4027 MEATRCWFNKFKSKDKIKSPKNKESTVSTKEGSRPPTNEEAPSNVTKQKAAAAKQYIENHYKKQMKSLQERKERRNMLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALKSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQLPGIAELKKKSTKTKRPSIKTLFDDESSKEANQPVQGSFLNLLPTQPEVPEKSESQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0549 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0549 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto3g0549 547 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 521 - -
Sto3g0549 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0549 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0549 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Sto3g0549 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto3g0549 547 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Sto3g0549 547 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
Sto3g0549 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto3g0549 547 MobiDBLite consensus disorder prediction 14 28 - -
Sto3g0549 547 MobiDBLite consensus disorder prediction 14 51 - -
Sto3g0549 547 Coils Coil 68 95 - -
Sto3g0549 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 521 - -
Sto3g0549 547 MobiDBLite consensus disorder prediction 499 547 - -
Sto3g0549 547 CDD STKc_NDR_like 117 482 - -
Sto3g0549 547 MobiDBLite consensus disorder prediction 499 518 - -
Sto3g0549 547 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Sto3g0549 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Sto3g0549 547 MobiDBLite consensus disorder prediction 519 547 - -
Sto3g0549 547 MobiDBLite consensus disorder prediction 29 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0549 Sto-Chr3 3648176 3654289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0549 1 541 AGC Kinase Gene Family AT4G14350 84.104 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sto3g0549 Pkinase 8.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0549 K08790 - mnt:21404309 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0549 3 3648176 3654289 Sto3g0549 3 3648176 3654289 ECH