Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0540 ATGGTGAGGTCCCAAATGAATTTCAAGAGGCTCTCACTCACTGACATTAAGATTGATATTAAGAGAGTCCCTAAGAAGAAAGATCTCCTTCAAGCAATGGAAGCTGCCGATGTCAAGAAGAAGTGGGAGAATAGCTCTTGGGGCAGAAAATTGATTGTTCAGAAGAGGAGGGCTTCCCTCAATGATTTTGACAGGTTCAAGCTAATGTTGACAAAGATCAAGAGGGCAGCTACTGTAAGGCAAGAGCTTGCTAAGCTGAAAAAGAGCGCATCTTAG 276 0.4312 MVRSQMNFKRLSLTDIKIDIKRVPKKKDLLQAMEAADVKKKWENSSWGRKLIVQKRRASLNDFDRFKLMLTKIKRAATVRQELAKLKKSAS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0540 91 Pfam Ribosomal protein L14 3 75 IPR002784 GO:0003735|GO:0005840|GO:0006412
Sto3g0540 91 SUPERFAMILY Translation proteins SH3-like domain 3 51 IPR008991 -
Sto3g0540 91 PANTHER 60S RIBOSOMAL PROTEIN L14 1 90 IPR039660 GO:0003723|GO:0003735
Sto3g0540 91 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 90 - -
Sto3g0540 91 Gene3D - 1 44 IPR014722 -
Sto3g0540 91 Gene3D - 50 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0540 Sto-Chr3 3575117 3575671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0540 1 91 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 79.121 2.85e-46 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0540 K02875 - gmx:100817659 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0540 3 3575117 3575671 Sto3g0540 3 3575117 3575671 ECH