Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0517 atggcAAGCGAAGCTGTAGTTGAAGGGTCTGAAGCTACCGCCGCATCGACGGAGgtagcggcggcggcggcggcggccgAGACTGGCTCCAAACACAAACTGGATAGAAAATGGACTTTTTGGTTCGATAATCAGTCGAAACCTAAGCAAGGTGCTGCTTGGGGAACCTCTCTTCGCAAGGTTTACACCTTCGAGACTGTCGAGGAGTTTTGGTGTTTGTATGACCAGATATTTAAGCCCAGCAAGTTGCCTGGTAATGCGGATTTCCACCTGTTCAAAGCTGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCTAATGGAGGAAAGTGGACTGCCGCCTGCAGCAGAAAGACTAACCTTGATTCCATGTGGCTTGAAACTTTGATGGCTTTGATTGGAGAGCAATTTGATGAGAGTGATGATATATGTGGTGTGGTAGCGAGTGTGCGGCAGAGGCAGGACAAACTTTCATTATGGACAAAGACAGCAGCAAACGAGGCTGCTCAGCTGAAACCTCAAAATCTGGATTCAGTTCAGTTTGAAGATCGTTCTGGGGTCACAATTCAAGATCATGATGGATCTGTGTGGATTTGCCCTTTCTTTTGGGAAGCATCAATATGGTATGACTGCCTTGATGAGCAGATTTCTTATGATGATCTTCTCATTAGCATCTGCATGAGCATTGGGAGGAAATGGAAGGAAATCATTGACGTTAATGATAAGATCTTCTATAGCTTTCATGATGATTCTAGAAGGGAAAGATCAGGGAAGGGACAGGGTCGATACAATGTTTAA 798 0.4286 MASEAVVEGSEATAASTEVAAAAAAAETGSKHKLDRKWTFWFDNQSKPKQGAAWGTSLRKVYTFETVEEFWCLYDQIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWTAACSRKTNLDSMWLETLMALIGEQFDESDDICGVVASVRQRQDKLSLWTKTAANEAAQLKPQNLDSVQFEDRSGVTIQDHDGSVWICPFFWEASIWYDCLDEQISYDDLLISICMSIGRKWKEIIDVNDKIFYSFHDDSRRERSGKGQGRYNV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0517 265 Pfam Eukaryotic initiation factor 4E 34 170 IPR001040 GO:0003723|GO:0003743|GO:0006413
Sto3g0517 265 Gene3D RNA Cap, Translation Initiation Factor Eif4e 3 197 IPR023398 -
Sto3g0517 265 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 225 255 IPR001040 GO:0003723|GO:0003743|GO:0006413
Sto3g0517 265 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 10 170 IPR001040 GO:0003723|GO:0003743|GO:0006413
Sto3g0517 265 PANTHER BNAA08G29940D PROTEIN 225 255 - -
Sto3g0517 265 PANTHER BNAA08G29940D PROTEIN 10 170 - -
Sto3g0517 265 ProSitePatterns Eukaryotic initiation factor 4E signature. 88 111 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Sto3g0517 265 SUPERFAMILY eIF4e-like 15 170 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0517 Sto-Chr3 3386499 3388917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0517 1 195 Eukaryotic Initiation Factors Gene Family AT5G35620 57.286 8.59e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0517 K03259 - rcu:8265745 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0517 3 3386499 3388917 Sto3g0517 3 3386499 3388917 ECH