Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0488 ATGGAGAGAGCAAAGAAGGTAGCAGCAGTAGTATCAAAGGATGGGGATGGAGAATACAGAAGCATAAGTGAAGCCATAGCTGAAGCTCCAAACTTGAGCTCAGAGAAATACACAATCTACGTGGAAGGTGGGATATATGAGGAGTACATCTCAATTCCAACTGAGAAGACAAATATAATGATAGTTGGAAAAGGGAAGCAATATACAAGGATTATTGGGAATCGCAGTACCTCTACAGGTACTGCACTTGATCAAACTGCCACTGTAGCGGTATACGGATCAGGATTCGTAGCGAAAAACATAGCATTCGTGAACAATGCAGGAAGGGAGGCAGGTCAAGGCGTGGCCTTACTGAACAGAGCAACCCAAACGGCCTTCTACAGATGCTCCTTCGAAGGCTACCAAGACACTTTATGGGCCGCATCTGGCCGTCAATTCTACAGAGAATGCGAAGTCTACGGCACCGTCGATTTCATCATGGGAAACGCCGCCGCCGTCTTCCAGAACTCCAAGCTCTACGCCAGACCCAAGCTCTTCATCACCTTCACCGCCCAATCACGCGCCGGCCAGTACGAACCCACCGCCTTCGTCTTCCAATTCTGCAAGTTCACCATATCCCCCGAGGCCGCACGCGGCAGATCGGAAGTCGCTAGGGCCACGCTGGGTCGCCCATGGAGGGCGTATTCCAGAGTGGTCATAATGGAATCGTATATTGACTCGATCATTGATCCGAAAGGGTGGGAAGTGTACGATTCGGTTCCGACGGATAAGTTGAGTTACATTGAGTATGGGAATGGAGGCGGAGGAGCCAAGACGGATGGGAGGATGACGTGGCCTGGGGTTCAGGCGGTTAGTGATGCTCAAAAGGTTGTTTGGTATACTGCTTCCAAATTCTTGCATGCGGATGCTTGGATTCCCCAAACTGGAATTCCTTATCACGGAGGACTTTAG 951 0.5016 MERAKKVAAVVSKDGDGEYRSISEAIAEAPNLSSEKYTIYVEGGIYEEYISIPTEKTNIMIVGKGKQYTRIIGNRSTSTGTALDQTATVAVYGSGFVAKNIAFVNNAGREAGQGVALLNRATQTAFYRCSFEGYQDTLWAASGRQFYRECEVYGTVDFIMGNAAAVFQNSKLYARPKLFITFTAQSRAGQYEPTAFVFQFCKFTISPEAARGRSEVARATLGRPWRAYSRVVIMESYIDSIIDPKGWEVYDSVPTDKLSYIEYGNGGGGAKTDGRMTWPGVQAVSDAQKVVWYTASKFLHADAWIPQTGIPYHGGL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0488 316 Gene3D - 7 316 IPR012334 -
Sto3g0488 316 Pfam Pectinesterase 9 301 IPR000070 GO:0030599|GO:0042545
Sto3g0488 316 PANTHER PECTINESTERASE 9 315 - -
Sto3g0488 316 PANTHER PECTINESTERASE 9 315 - -
Sto3g0488 316 SUPERFAMILY Pectin lyase-like 6 315 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0488 Sto-Chr3 3185804 3188278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0488 10 316 Carbohydrate Esterase AT3G05620 45.981 3.96e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0488 K01051 - gmx:102665195 326.635