Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0487 ATGGCTAGGTGGAGCAGTAGTGGTGTGTGCAGGTTGAATAATATTATGTTTGTAATAATTGTACTATTCTCATCTTATGCTACTTACAGTAGTAGTGATGGTGTGACACTAGTGTCGAGAGACGGGGAAGGAGATTACGCTACAATAAGTGAAGCCATAGCAGAAGCTCCTACACATCTCACCCACACCAAATACATCATTCACCTTCGACCTGGAATCTACCACGAGTATCTCACCATCCCTCCTAACAAAACCAACATTTTTCTCATTGGTCAAGGTCCACACAACACCAAGATTGTTGGGAATCGCAGTGCCTCTAACCCACCTTTCATCTTGTCTCGAACTGCCACAGTagCGATTGAGGGAGCGGGCTTCGTGGCCCAAGGAATAGCGTTTGTGAATTGGGCTGGGCCGAAAGCGGGCCAGGGGATAGCGCTGCTAAACGAAGGAGACGAGTCGGCCTTCTACAAATGCTCATTCGAGGGGTTCCAGGATACACTTTGGGCCTCAACGGGCCGACAGTTCTACCGCGAATGCGACGTGTACGGGTCCGTGGACTTCGTGATGGGAAACGCAGCTGCCGTTTTCCAAAACTGCGCTCTCTACGCACGCTTCCGTAAACACGCGGTTTTCACGGCCCAGTCTCGCGACAACCCCTTGGAAGCGACGGGTTTCGTTTTCCAGAATTGTCGTTTCACGGTGTCACCGGAGGAGAGGGAGTTATGGGGTGTGGGCGGGAGCATATTAGGGAGGCCGTGGAGGGCGTATTCGAGGGTTGTGATATTGCGGTCCTATATTGATTCAATTGTGAGCCCCAGTGGGTGGGGGGAGATGGAGGGGACGCCTACGGATAAAGCCACGTATGTGGAGTATGGGAACGAAGGGCCCGGATCTGATACACGTGGCAGAGTGAGGTGGCCTGGTGTGATGGAGGTGCATGATGTGGAGGCGGTGAGAGGCTTCGCTGCCTCCAATTTTCTAGAGGCAGACACTTGGATTCCCAACACTGGGGTTCCCTACCTTGGAAGACTATTataa 1038 0.5202 MARWSSSGVCRLNNIMFVIIVLFSSYATYSSSDGVTLVSRDGEGDYATISEAIAEAPTHLTHTKYIIHLRPGIYHEYLTIPPNKTNIFLIGQGPHNTKIVGNRSASNPPFILSRTATVAIEGAGFVAQGIAFVNWAGPKAGQGIALLNEGDESAFYKCSFEGFQDTLWASTGRQFYRECDVYGSVDFVMGNAAAVFQNCALYARFRKHAVFTAQSRDNPLEATGFVFQNCRFTVSPEERELWGVGGSILGRPWRAYSRVVILRSYIDSIVSPSGWGEMEGTPTDKATYVEYGNEGPGSDTRGRVRWPGVMEVHDVEAVRGFAASNFLEADTWIPNTGVPYLGRLL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0487 345 SUPERFAMILY Pectin lyase-like 32 341 IPR011050 -
Sto3g0487 345 Pfam Pectinesterase 37 330 IPR000070 GO:0030599|GO:0042545
Sto3g0487 345 PANTHER PECTINESTERASE 18 340 - -
Sto3g0487 345 PANTHER PECTINESTERASE 18 340 - -
Sto3g0487 345 Gene3D - 35 345 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0487 Sto-Chr3 3181642 3182773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0487 37 340 Carbohydrate Esterase AT4G02320 41.234 3.74e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0487 K01051 - gmx:102665195 322.398