Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0456 ATGTCAGGGAATTTCAATAAAAGGAGAGCTTTGGCGGACAGGTGTTCTGGTATTTTACTATTGTTGACTTTACTTCTTTATACCACAGAGGGCTTGAACACAGAGGGACAGTACCTCCTAGAGCTGAAGAATAGTCTTCATGATGAATCTAATTTTTTGGCGAATTGGAAGTCTACTGATGCAACACCATGTGGATGGAGAGGTGTAAAATGCACTTCTGGCAATAATTCAGTGGTCTGGTACCTTAATTTGAGTTCAATGAATCTTTCtggaacactaaatcctaacatTGGGGGTCTAGTGCACCTAACTTATCTCAATCTTGCTTTCAACAATCTGATGGGAAATATACCCAAGGATATTGGAAATTGTTCGAGTTTAGAACATCTTTATTTGAACAATAATCAATTGGAGGGACGAGTTCCCGCTGAATTGGGCAAGCTATCCCTTTTAAGAAGTTTGAATTTTTGCAACAACAAAATCTCAGGTACTCTTCCAGATGAGTTGGGAAACTTGTCTTCATTGGTTGAGCTTGTGGCCTATACAAACAATCTTACAGGTCCCCTGCCTCGTTCTATTGGAAATCTCAAGAGTCTCACAACTTTAAGAGCTGGGGGAAATGGAATTTCTGGTAGCTTGCCAAGTGAGATTGGTGGATGTAAGAGCTTAGAATATCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTACCAAGAGAGATTGGGATGATTCAGAACTTAACAGAACTGATTTTATGGAATAACCAGTTATCAGGAATTATTCCTAAAGAACTTGGAAATTGTACCAGGCTTGATACCCTTGCTTTATATGGAAATGATCTTGTTGGATATATACCTGAGGAGATTGGGAATCTCAGATCACTGAGGAAGTTATACCTTTACAGAAACAAGTTGAATGGAACCATTCCAAGGACAATTGGGAATCTTTCTCTGGCACTAGAAATTGATTTCTCAGAGAATGCTTTAGTGGGTGATATTCCCACTGAGATCAGCAAACTAAGTGGTCTTCGCTTGCTCTTTCTCTTTGAGAACCAGCTATCTGGTGTTATACCAAACGAGTTTAGTAGCTTGGGGAACCTGTCGAGGTTGGACCTGTCCATTAACAATCTCACAGGTCCAATTCCATTGGGGTTCCAGTATTTGACTCGAATGTCTCAGTTACAACTTTTTGACAATTCTCTAAGTGGAAATATTCCTCCAAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCAGACAATCACTTGACAGGAAGCATACCTCCTCATCTATGTCGAAATTCTAACTTGATGTTGTTGAATCTGGCTTCTAATAAGCTGTATGGAAATATACCAACTGGGATATTGAACTGTGAATCATTGGCACAACTGCTTTTGGTTGGAAATAGTTTTACTGGTGGCTTTCCTACCGAGCTGTGCAAACTGGTTAACCTCACTGCAATTGAGTTGAACCAGAACAGGTTCAGTGGTCCTATTCCTCCTGAGATTGGGAGCTGCCAGAAGTTGCAGAGGCTTCATATTGCAAACAACTACTTCAGATTAGAGTTGCCTAAAGAAATAGGAAATCTTTCTCAGTTAGTCACCTTTAATGTTTCATCCAATTCTTTCGTTGGACCAATCCCACGTGAAATTGTTAGATGCAAAAAGCTTCAGCGACTTGATCTCAGTGAGAACAGCTTTACTGGCTCCTTGCCAGATGAGCTTGGTACACTCTCACAGTTGGAGCTTCTCAAGCTCTCAGATAATAAACTCACTGGGCAAATTCCTGCAGCATTAGGCAATCTGCTTCATTTGACTGCACTGCAGATGGGTGGCAATTTACTTTCTGGTGAAATACCTCCTGATCTGGGTAATCTCTCAAGTTTACAGATAGCATTGAATCTCAGTTACAATAATCTTAGTGGAAGTATACCTGATAAGCTTGGGAACCTTAATCTTCTTGAGTTCCTTTTTCTCAATAACAATCATTTGACTGGTGAAATTCCCAGCACACTTGAAAACCTTTCAAGTTTGCTGGGATGCAATTTCTCATACAATAATCTCTCTGGACCTATACCTTCCATTCCACTATTTGAAAATATGGCAATGAGCAGCTTTGTTGGTAATAATGGCCTCTGTGGTGCTCCTCTGCTTGACTGCAACACTAATCCATCTTCTCGTTCTGATCCTCCAGGGAAAAGTGTTGATAGTCCTCGTACCAAAATTATCACAATTGTTGCAACAGCTGTTGGTGGTGTTTCTCTCATTCTGATAgtaatcattttatatattatgagaCGTCCTCCGGAGTCTGTTTCTTCTTTGCGGGATTCTGAGATTCCCTCCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTTCAAGATTTACTTGAAGCTACCAATAATTTTCATGACAGTTATGTTATAGGAAGAGGGGCATGTGGAACGGTTTATAAGGCAGTGATGCTATCTGGGAAGACTATTGCTGTGAAGAAGTTAGCTTCCAACAGGGAAGGGAACAACATTGAGAATAGCTTCCGGGCTGAGATATCAACCCTTGGAAACATAAGACATCGAAATATAGTGAAGCTGTATGGGTTTTGCTATCACCAAGGTTCCAATCTGTTACTATATGAGTACATGGCAAGGGGTAGCTTAGGAGAACAACTTCATGGTTTTGCATGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCACGACTGCAAGCCAAAGATCATTCACCGTgatataaaatcaaataacaTTCTgcttgatgataattttgaggCCCATGTTGGTGATTTTGGTTTGGCCAAAGTCATTGATATGCCTCAATCAAAATCGATGTCAGCAGTTGCTGGATCTTACGGCTATATTGCTCCTGAATATGCATATACTATGAAGGTGACTGAGAAGTGTGACATCTATAGCTATGGAGTTGTTCTGTTGGAGTTGCTAACAGGAAGAACTCCAGTTCAGCCACTAGAGCAAGGAGGAGATCTCGTGACATATGTAAGAAGCTACATTCGGAGCCATAACAACACATTGTCTTGTGGGGTGCTTGACAGTCGTCTCAACCTTCAAGACCAAAGCATTGTGAATCACATGCTTACTGTTCTCAAAATTGCTTTGCTCTGCACAAACATGACCCCACTTGATCGCCCATCCATGCGCCAAGTAGTGTTGATGCTTATGGAGTCCAACGAAAGAGAAGGAAACTCGGCCAATACTTCTCCAAATCATGATGAGGATGTTCCTTCCAAAGATGAAAATGATGGCACTCAAAAGAGAATGTGA 3351 0.4032 MSGNFNKRRALADRCSGILLLLTLLLYTTEGLNTEGQYLLELKNSLHDESNFLANWKSTDATPCGWRGVKCTSGNNSVVWYLNLSSMNLSGTLNPNIGGLVHLTYLNLAFNNLMGNIPKDIGNCSSLEHLYLNNNQLEGRVPAELGKLSLLRSLNFCNNKISGTLPDELGNLSSLVELVAYTNNLTGPLPRSIGNLKSLTTLRAGGNGISGSLPSEIGGCKSLEYLGLAQNQIGGELPREIGMIQNLTELILWNNQLSGIIPKELGNCTRLDTLALYGNDLVGYIPEEIGNLRSLRKLYLYRNKLNGTIPRTIGNLSLALEIDFSENALVGDIPTEISKLSGLRLLFLFENQLSGVIPNEFSSLGNLSRLDLSINNLTGPIPLGFQYLTRMSQLQLFDNSLSGNIPPSLGLYSPLWVVDFSDNHLTGSIPPHLCRNSNLMLLNLASNKLYGNIPTGILNCESLAQLLLVGNSFTGGFPTELCKLVNLTAIELNQNRFSGPIPPEIGSCQKLQRLHIANNYFRLELPKEIGNLSQLVTFNVSSNSFVGPIPREIVRCKKLQRLDLSENSFTGSLPDELGTLSQLELLKLSDNKLTGQIPAALGNLLHLTALQMGGNLLSGEIPPDLGNLSSLQIALNLSYNNLSGSIPDKLGNLNLLEFLFLNNNHLTGEIPSTLENLSSLLGCNFSYNNLSGPIPSIPLFENMAMSSFVGNNGLCGAPLLDCNTNPSSRSDPPGKSVDSPRTKIITIVATAVGGVSLILIVIILYIMRRPPESVSSLRDSEIPSPDSDIYFPPKDGFTFQDLLEATNNFHDSYVIGRGACGTVYKAVMLSGKTIAVKKLASNREGNNIENSFRAEISTLGNIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFACNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDDNFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTYVRSYIRSHNNTLSCGVLDSRLNLQDQSIVNHMLTVLKIALLCTNMTPLDRPSMRQVVLMLMESNEREGNSANTSPNHDEDVPSKDENDGTQKRM 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0456 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Sto3g0456 1116 Gene3D Transferase(Phosphotransferase) domain 1 887 1110 - -
Sto3g0456 1116 Gene3D Phosphorylase Kinase; domain 1 780 886 - -
Sto3g0456 1116 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Sto3g0456 1116 SMART LRR_typ_2 364 387 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 484 508 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 100 124 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 580 603 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 653 677 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 292 316 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 604 628 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 196 220 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 244 268 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 340 363 IPR003591 -
Sto3g0456 1116 SMART LRR_typ_2 148 172 IPR003591 -
Sto3g0456 1116 Pfam Leucine rich repeat 558 617 IPR001611 GO:0005515
Sto3g0456 1116 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Sto3g0456 1116 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0456 1116 Gene3D Ribonuclease Inhibitor 284 389 IPR032675 -
Sto3g0456 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 1094 - -
Sto3g0456 1116 Gene3D Ribonuclease Inhibitor 460 726 IPR032675 -
Sto3g0456 1116 Pfam Protein kinase domain 810 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0456 1116 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Sto3g0456 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1094 - -
Sto3g0456 1116 Gene3D Ribonuclease Inhibitor 390 459 IPR032675 -
Sto3g0456 1116 MobiDBLite consensus disorder prediction 1087 1116 - -
Sto3g0456 1116 SUPERFAMILY Protein kinase-like (PK-like) 784 1082 IPR011009 -
Sto3g0456 1116 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Sto3g0456 1116 MobiDBLite consensus disorder prediction 1100 1116 - -
Sto3g0456 1116 SUPERFAMILY L domain-like 386 720 - -
Sto3g0456 1116 SUPERFAMILY L domain-like 34 328 - -
Sto3g0456 1116 ProSiteProfiles Protein kinase domain profile. 809 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0456 1116 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0456 Sto-Chr3 2965066 2969372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0456 54 1084 Receptor kinase-like Gene Family AT1G73080 37.813 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto3g0456 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0456 - - pop:7482772 1629.38