Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0435 ATGAATAGTGAGGCTCCAAGTGCTCGATATATGTCTGATGCTTCAATTGAAAATGACAATAATGAAGACAATATATGTCCACAAACTGGCGAAGAATTTTCAGCTGACTTCTATAGGGATCGCTTTGGTTTAAGGAGACTACCTATCACACCTGATCATGTGGATATTCATCGCCAGCCAATAAATAGATTGGGTTTTGATTCTAATAATCCCAATAATTATCAGGTAGGTTATGAGGATCTTTCACGTGTTGTTAGGCTAAGGAGAGCGGATTCTGATAGTAATAACTCAGATTTGTCAGATTTTGCTCCCACAACAGGAGGATACCTTAATAATGCTGCTGAAACTAACAATTTGAATAGATTCCAGTGGGAACGTGGTGGTATTGGTATTGGACAAGTATCAATATCTGGTAGAGTTTCTGAGGATGTTTATTCTGATCATTTTTCCTCAACACCAACTGCGTCTGCCCCCATTTATATAGCTGAATCCCCCCAGTCATGTCATCCTTATCTCTCATCATTTTCAGATGCTTCTTTTTATAAGAAGATAAAGTTTCTGTGTAgctttggtggaagaatattaCCAAGGCCTAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATTATATCCATTACTAAGAACATCACTTGGGAGCAGCTTATGGAGAAGACTTATGCAATTTGCAATCATTCTCACATTATCAAATACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTCATCATATGATAGAGGAATATGAAGAACAAGAAAGACTTGGAGGCTCTCAACGATTGCGGATTTTTCTCATATCTTCAAATGAACCTGAGAGCCCAACCTCTATTGAAGCAAGAGTCAATCAGACAGGTGAAGTTGATTATCAGTATGTTGTTGCAGTTAATGGCATGGTGGATCCAAGTCCACGCAAGAGCTCGAGTGGGCAAAGTTTAACAAGCCAAACAAGCCAGTTAGGAAACGCCTCTGACTACAATAGTCCAAGACTTTTTAAGGAATCTCCTACATCTGCATTCACTTGGGATATGAAGGATCGCAGCCCAATGTCCCCACGTGTGGGCGGAGGATTATTCTCAAAACCTGGTCTTCAGTTTTTATCAGCACTTCAAGTTCCAGTCAAGTCCTTTAATCATCAATCACCTTCTAGTCCTATATCTCGTATTTCTGTTCAGCCTAAGGATCCCAAAATTTCCAATGTAGAGCTACTTATGGATCAAACATGCAATGCTAGTAGTAATGAAAGCCTTTTTCCCTTTGTAATGGATAGAGTTCAATGTGACAATTCCTTGTATAGAGAAGATGCCAGTTATGTTGATCCCCATGCATACTATAACAACCTTGCCCAGGGGCCTCCCCTTCCGAATTACCATCGTAATAATCAACATATAATGGAGGCTGATCACCCCAGGAATGCCAATGATGACGTTCAATTTCACATCAGAAGCCATAGTGAAGATTTTGTCTCTTCTGCAGTGAGTGGTCAATTTGATacaatttttgaaacacccaaGCGTACAAATGAGTCATACCATTTTGACAAGAGTGTGTCTCATACTGAAGGGACATCTTCAGTGTCTAATAATAGAGATAGAGGAGGATCTTATTCCAGATTGTTGCATGCAATTTCTGATCCATTATTGCAGAAGAGTGACGAGTGCTTTGAAAATCATTTGCAGCCTTCCCCTGCAGTGAAGGGAAACGTTTCACCTTTGGTGGAAATTTCTAGTTCCTTTCGTGAAACGCCATTACTACAGGGAGAGATAATTGACAACAAAGTCCATAGGGATGAGTATCAAATTCTCCCCCATTTTGAAATGATAGACAAATGCAAGGGAATTTTGGATCCTAGTCCAGAGATCTTGCTTTGTGCCGATAATAACAATGCCTGCTCTGATGATATTGAAAGATTCTTTGAAGGTAGTACTGAAGCTACTTTACATGAcaatatctttgattttaaagaTTTAGATTACATCAACGGGAAACAAGGTGCTTGCTTGTCTTCAGCCGAGTTACAAAGCAGTGAGTTTAATTTATTAGCTTCACCAAATTTCGAATCTACAATAAACTTGAGGGAGAAACCACATGTTCTGCAACTAAACACAACTGCTTCTGACTTTCTCATGAGGAGCCAAACTTCTACAATGTATCCCCAGTTTACTATGTTAGAGACAGAAAGTAACCAAACATTTCCCCTTGGCTCCTCTAATTTACAACATATTGCGACCCAAAATGACAAGGAGTCTATACTGCTAATCTCTAATACAGACATGGGTTCAGCTTCCATAGGAGAGGCTTTTCTCCCTAATGAGAATCCTACCAAATGTCCTTATGAGAAGAATGAAAAGACATCTATTAATAAAGATTCTAATGCCAGGCATAGCAATGAGTTAAGTGACCAATCACAGCTCTTTGTTGGCAGTCAGGAAATTAAGAAGTTAAAACCAATAGATATTGTCAATAGAGCAACTAATAGTATCTCTTCTGGTACTCAACCATGCTCAAAAGTTGTCTTAGATGTAGACAAAGAGGTAGAAGCTGAATCTGCATCACCTGAAAAGGAAGAATCAGAGAGTGTCAGTCCAGAATCTCAAAGTGAGCTTGCAAATGATGATAGTAATAACTTCAATAAGCTTGTTGGGTCAACGGCTGCTGAAATGGAGGCTGAACTCTATGGTTTGCAGATTATTAAGAATGCTGATATTGAAGAACTGCGAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGAGGAACAGATGTTGCAATCAAGAGATTAAAAAGCAGTTGTTTTACTGGCAGATTATCAGAGCAAGAGCGGTTGACTAAAGATTTCTGGCGAGAGGCAAAAATTTTGTCAACTCTTCACCATCCAAACGTGGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCAGGTGATACATTGGCAACTCTAACAGAATATATGGTGCATGGATCATTGAGGAATGTCCTCATAAGGAAGGAAAGAGTGCTTGACCGCCGGAAAAGGCTTATGATTGCAATGGATGCAGCGTTTGGCATGGAATATTTGCATTTCAAGAATATTGTTCATTTTGATTTGAAATGTGATAATTTACTTGTCAATTTGGGGGATCCTGAGCGACCTGTTTGCAAGGTTGGTGACTTTGGCCTATCACGAATTAAGCGCAACACTCTTGTTTCTGGTGGTGTGAGAGGAACCCTTCCCTGGATGGCACCAGAATTACTAGATGGTAACAACAGTGGGGTTTCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAGCCATATGCTAACTTGCACTGTGGTGCTATCATAGGAGGGATTGTGAATAACACACTGAGACCTTCAATCCCAAAAAGATGTGATTCTGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGCCCTGATCCTGCAGCCAGGCCATCATTCACAGAAATAACACATAGATTTCGCATCATGCAAGCTGCTCTTCCTAAGAAGAGACACAATCTTCCAACTCGATAA 3600 0.3975 MNSEAPSARYMSDASIENDNNEDNICPQTGEEFSADFYRDRFGLRRLPITPDHVDIHRQPINRLGFDSNNPNNYQVGYEDLSRVVRLRRADSDSNNSDLSDFAPTTGGYLNNAAETNNLNRFQWERGGIGIGQVSISGRVSEDVYSDHFSSTPTASAPIYIAESPQSCHPYLSSFSDASFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISITKNITWEQLMEKTYAICNHSHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEEQERLGGSQRLRIFLISSNEPESPTSIEARVNQTGEVDYQYVVAVNGMVDPSPRKSSSGQSLTSQTSQLGNASDYNSPRLFKESPTSAFTWDMKDRSPMSPRVGGGLFSKPGLQFLSALQVPVKSFNHQSPSSPISRISVQPKDPKISNVELLMDQTCNASSNESLFPFVMDRVQCDNSLYREDASYVDPHAYYNNLAQGPPLPNYHRNNQHIMEADHPRNANDDVQFHIRSHSEDFVSSAVSGQFDTIFETPKRTNESYHFDKSVSHTEGTSSVSNNRDRGGSYSRLLHAISDPLLQKSDECFENHLQPSPAVKGNVSPLVEISSSFRETPLLQGEIIDNKVHRDEYQILPHFEMIDKCKGILDPSPEILLCADNNNACSDDIERFFEGSTEATLHDNIFDFKDLDYINGKQGACLSSAELQSSEFNLLASPNFESTINLREKPHVLQLNTTASDFLMRSQTSTMYPQFTMLETESNQTFPLGSSNLQHIATQNDKESILLISNTDMGSASIGEAFLPNENPTKCPYEKNEKTSINKDSNARHSNELSDQSQLFVGSQEIKKLKPIDIVNRATNSISSGTQPCSKVVLDVDKEVEAESASPEKEESESVSPESQSELANDDSNNFNKLVGSTAAEMEAELYGLQIIKNADIEELRELGSGTFGTVYHGKWRGTDVAIKRLKSSCFTGRLSEQERLTKDFWREAKILSTLHHPNVVAFYGVVPDGPGDTLATLTEYMVHGSLRNVLIRKERVLDRRKRLMIAMDAAFGMEYLHFKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNNSGVSEKVDVFSFGIAMWEILTGEEPYANLHCGAIIGGIVNNTLRPSIPKRCDSEWKKLMEECWSPDPAARPSFTEITHRFRIMQAALPKKRHNLPTR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0435 1199 MobiDBLite consensus disorder prediction 861 878 - -
Sto3g0435 1199 Pfam PB1 domain 199 282 IPR000270 GO:0005515
Sto3g0435 1199 SMART PB1_new 198 285 IPR000270 GO:0005515
Sto3g0435 1199 CDD PB1_UP2 187 283 - -
Sto3g0435 1199 Gene3D Transferase(Phosphotransferase) domain 1 1007 1197 - -
Sto3g0435 1199 ProSiteProfiles Protein kinase domain profile. 919 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0435 1199 MobiDBLite consensus disorder prediction 793 812 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 1 28 - -
Sto3g0435 1199 SUPERFAMILY Protein kinase-like (PK-like) 908 1180 IPR011009 -
Sto3g0435 1199 Pfam Protein tyrosine and serine/threonine kinase 921 1181 IPR001245 GO:0004672|GO:0006468
Sto3g0435 1199 ProSitePatterns Protein kinases ATP-binding region signature. 925 946 IPR017441 GO:0005524
Sto3g0435 1199 MobiDBLite consensus disorder prediction 317 348 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 318 348 - -
Sto3g0435 1199 CDD STKc_MAP3K-like 925 1182 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 1 29 - -
Sto3g0435 1199 SUPERFAMILY CAD & PB1 domains 199 288 - -
Sto3g0435 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Sto3g0435 1199 Gene3D Phosphorylase Kinase; domain 1 912 1006 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 783 818 - -
Sto3g0435 1199 PANTHER SERINE-THREONINE PROTEIN KINASE 84 1195 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 879 894 - -
Sto3g0435 1199 PRINTS Tyrosine kinase catalytic domain signature 1001 1014 IPR001245 GO:0004672|GO:0006468
Sto3g0435 1199 PRINTS Tyrosine kinase catalytic domain signature 1038 1056 IPR001245 GO:0004672|GO:0006468
Sto3g0435 1199 PRINTS Tyrosine kinase catalytic domain signature 1109 1131 IPR001245 GO:0004672|GO:0006468
Sto3g0435 1199 PRINTS Tyrosine kinase catalytic domain signature 1153 1175 IPR001245 GO:0004672|GO:0006468
Sto3g0435 1199 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 84 1195 - -
Sto3g0435 1199 SMART serkin_6 919 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0435 1199 Gene3D - 202 286 - -
Sto3g0435 1199 MobiDBLite consensus disorder prediction 861 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0435 Sto-Chr3 2862884 2867262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0435 183 334 MAP Kinase Kinase Kinase AT1G16270 53.595 1.54e-39 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sto3g0435 PK_Tyr_Ser-Thr 6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0435 - - aprc:113872358 1272.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0435 3 2862884 2867262 Sto3g0435 3 2862884 2867262 ECH